ContentslistsavailableatScienceDirect
Veterinary
Parasitology
j ourn a l h o m e pa g e :w w w . e l s e v i e r . c o m / l o c a t e / v e t p a r
Short
Communication
Genetic
diversity
in
Trypanosoma
theileri
from
Sri
Lankan
cattle
and
water
buffaloes
Naoaki
Yokoyama
a,∗,
Thillaiampalam
Sivakumar
a,b,
Shintaro
Fukushi
a,
Muncharee
Tattiyapong
a,
Bumduuren
Tuvshintulga
a,
Hemal
Kothalawala
b,
Seekkuge
Susil
Priyantha
Silva
b,
Ikuo
Igarashi
a,
Noboru
Inoue
aaNationalResearchCenterforProtozoanDiseases,ObihiroUniversityofAgricultureandVeterinaryMedicine,Hokkaido,Japan bVeterinaryResearchInstitute,Peradeniya,SriLanka
a
r
t
i
c
l
e
i
n
f
o
Articlehistory: Received12June2014 Receivedinrevisedform 13November2014 Accepted11December2014
Keywords: Cattle
Geneticdiversity SriLanka
Trypanosomatheileri Waterbuffalo
a
b
s
t
r
a
c
t
Trypanosomatheileriisahemoprotozoanparasitethatinfectsvariousruminantspecies. Weinvestigatedtheepidemiologyofthisparasiteamongcattleandwaterbuffalo popula-tionsbredinSriLanka,usingadiagnosticPCRassaybasedonthecathepsinL-likeprotein (CATL)gene.BloodDNAsamplessourcedfromcattle(n=316)andwaterbuffaloes(n=320) bredindifferentgeographicalareasofSriLankawerePCRscreenedforT.theileri. Para-siteDNAwasdetectedincattleandwaterbuffaloesalikeinallthesamplinglocations. TheoverallT.theileri-positiveratewashigherinwaterbuffaloes(15.9%)thanincattle (7.6%).Subsequently,PCRampliconsweresequencedandthepartialCATLsequenceswere phylogeneticallyanalyzed.TheidentityvaluesfortheCATLgenewere89.6–99.7%among thecattle-derivedsequences,comparedwithvaluesof90.7–100%forthebuffalo-derived sequences.However,thecattle-derivedsequencesshared88.2–100%identityvalueswith thosefrombuffaloes.Inthephylogenetictree,theSriLankanCATLgenesequencesfellinto twomajorclades(TthIandTthII),bothofwhichcontainCATLsequencesfromseveralother countries.AlthoughmostoftheCATLsequencesfromSriLankancattleandbuffaloes clus-teredindependently,twobuffalo-derivedsequenceswereobservedtobecloselyrelatedto thoseoftheSriLankancattle.Furthermore,aSriLankanbuffalosequenceclusteredwith CATLgenesequencesfromBrazilianbuffaloandThaicattle.Inadditiontoreportingthe firstPCR-basedsurveyofT.theileriamongSriLankan-bredcattleandwaterbuffaloes,the presentstudyfoundthatsomeoftheCATLgenefragmentssourcedfromwaterbuffaloes sharedsimilaritywiththosedeterminedfromcattleinthiscountry.
©2014ElsevierB.V.Allrightsreserved.
1. Introduction
Variousspecies of Trypanosoma parasites are known toinfectseveralwildand domesticanimals worldwide.
∗ Correspondingauthorat:NationalResearchCenterforProtozoan Diseases, ObihiroUniversity ofAgricultureandVeterinaryMedicine, Inada-cho,Obihiro,Hokkaido080-8555,Japan.Tel.:+81155495649; fax:+81155495643.
E-mailaddress:[email protected](N.Yokoyama).
Species of mammalian trypanosomes were divided by
Hoare(1964)intotwomajorsections,Stercorariaand Sali-varia.TrypanosomesoftheSalivariasection,whichinclude
Trypanosomavivax,T.congelense,T.brucei,andT.evansi,are
transmittedtotheirvertebratehostduringthebloodmeal ofaparasite-infectedinsectvector,inwhichparasite devel-opmentisterminatedinthesalivaryglands(Haagetal., 1998;VanDenAbbeeleetal.,2010;Vickermanetal.,1998). Incontrast,forthetrypanosomesoftheStercorariasection, whichincludeT.cruzi,T.melophagium,andT.theileri,the finalstagesofparasitedevelopmenttakeplaceinthelower
digestivetractofthevectorsand,therefore,theseparasite speciesaretransmittedbycontaminationwith parasite-infectedinsectvectorexcreta(SchusterandSchaub,2000). AmongtheTrypanosomaparasites,T.vivax,T.congelense,
andT.bruceiareconsideredtobethemostpathogenicto
susceptibleanimals(Steverding,2008).However,T.evansi
alsocausesaseverewastingdiseaseininfectedcattle(Brun etal.,1998;Desquesnesetal.,2013).Ontheotherhand,T.
theilerihasalsobeenimplicatedinsporadicclinicalcases
indomesticanimalsinvariouscountries(Dohertyetal., 1993;Soodetal.,2011;Villaetal.,2008).Therefore,the epidemiologyofT.theilerishouldbestudied.Trypanosoma
theileriisalargeTrypanosomaparasitevectoredbytabanid
flies(Böseetal.,1987)andticks(Latifetal.,2004;Shastri andDeshpande,1981).
Severalgeneticmarkergenes,suchasthesmall sub-unitrRNA(ssrRNA),internaltranscribedspacer1(ITS1), cytochromeb(Cytb),splicedleader(SL),glycosomal glyc-eraldehyde 3-phosphate dehydrogenase (gGAPDH), and cathepsinL-likeprotein(CATL)genes,havebeenusedto analyzegeneticvariationinT.theileriparasitesfrom sev-eral host animals, including cattle, buffaloes, and deer (Fisheretal.,2013;Garciaetal.,2011a,b;Rodriguesetal., 2006,2010).Inthesephylogeneticanalyses,theT.theileri
genesequences alwaysclusteredindependently accord-ingtothehostspecies (Fisheretal.,2013;Garciaetal., 2011a,b;Rodriguesetal.,2006,2010).Thesefindingsled theresearchersinthesestudiestoconcludethatT. thei-lerigenotypes might be host-specific.However, genetic diversityinT.theilerihasonlybeeninvestigatedinasmall numberofcountries,includingBrazil,Venezuela,Thailand, Vietnam,Philippines,andtheUnitedStates(Fisheretal., 2013;Garciaetal.,2011a,b;Rodriguesetal.,2006,2010; Sivakumaretal.,2013;Yba ˜nezetal.,2013).Therefore, fur-theranalysesofT.theileripopulationsinotherendemic countries are required to gain a more comprehensive understandingofthegeneticdiversityandhostspecificity ofthisparasite.
ThepresenceofT.theileriinSriLankanwaterbuffaloes, basedonmorphologicalandindirectimmunofluorescence antibodytests,haspreviously beenreported(Weilgama etal.,1989).However,moleculardetectionmethodshave notbeenusedtodetectT.theileriinSriLanka.Therefore,the aimofthepresentstudywastodeterminetheprevalence
ofT.theileriincattleand waterbuffaloesbredin
differ-entgeographicallocationsofSriLanka,usingadiagnostic PCRassaybasedontheCATLgene,andtoanalyzegenetic diversityin theparasites. Our findings indicatedthat T.
theileriisacommonparasiteamongthecattleandwater
buffaloesbredin SriLanka, and thattheparasite popu-lationsare genetically diverse. Additionally, our results indicatedthatsomeofthewaterbuffalo-derivedT. thei-leriCATLnucleotidesequencesdeterminedinthepresent studysharedhighidentityscoreswiththosefromcattle.
2. Materialsandmethods
2.1. BloodsamplingandDNAextraction
The blood samples collected from cattle and water buffaloes in Sri Lanka have been described previously
(Sivakumaretal.,2012b,2014).Briefly,316cattlereared in four different districts (Nuwara Eliya, Polonnaruwa, Ampara,andJaffna),and320buffaloesbredinthree dif-ferent districts (Polonnaruwa, Mannar, and Mullaitivu) were sampled in April and June 2011 and in February 2013,respectively.Alltheanimalswereover 1year-old and apparently healthyduring thesampling.DNA sam-pleswereextractedfrom200lofwholeblood usinga
commercialkitaccordingtothemanufacturer’s instruc-tions(Qiagen,Hilden,Germany).TheDNAsampleswere storedat–20◦Cuntilfurtheruse.TheseDNAsampleswere
previouslyusedforinvestigationsonbovineBabesiaand
Theileriaparasites(Sivakumaretal.,2012b,2014).
2.2. DetectionofT.theileriusingadiagnosticPCRassay
ApreviouslyestablishedT.theileri-specificPCRassay, basedontheCATLgene,wasemployedtoscreentheDNA samples(Rodrigueset al.,2010).ThePCRreaction mix-turesandcyclingconditionsdescribedbyRodriguesetal. (2010) wereused withmodifications.Briefly, PCR reac-tionscontained1lof10× PCRreactionbuffer,200M
dNTPs(AppliedBiosystems,Branchburg,NJ),0.5Mof
for-ward(5′-CGTCTCTGGCTCCGGTCAAAC-3′)andreverse(5′
-TTAAAGCTTCCACGAGTTCTTGATGATCCAGTA-3′) primers,
0.5 units of Taq polymerase (Applied Biosystems), and 5.9lofdoubledistilledwater.Aftertheadditionof1lof
eachDNAsample,themixturewassubjectedtoanenzyme activationstepat95◦Cfor5min,followedby45cycleseach
includingadenaturingstepat95◦Cfor30s,anannealing
stepat55◦Cfor1min,andanextensionstepat72◦Cfor
1min.Afterfinalelongationat72◦C for10min,thePCR
productswereanalyzedbyagarosegelelectrophoresis.PCR ampliconscloseinsizetothepositivecontrolwere
consid-eredT.theileri-positive.
2.3. Cloning,sequencing,andphylogeneticanalysis
PCR amplicons with high band-intensities, detected from both cattle and water buffaloes, werecloned into plasmid vectorsand sequenced as described previously (Sivakumar et al.,2012a).For each cloned product,the bothstrandsofasinglecloneweresequenced.Resultant sequences werethen analyzedby basiclocal alignment tool (BLAST) (http://blast.ncbi.nlm.nih.gov/Blast.cgi). Identity values among the CATL gene sequences were calculated using the Emboss needle online program (http://emboss.bioinformatics.nl/cgi-bin/emboss/needle). Singlenucleotidepolymorphisms amongtheSri Lankan
Table1
PCRdetectionofT.theileriinSriLankancattleandwaterbuffaloes.
Districts Cattle Waterbuffaloes
No.sample No.positive %(CIb) No.sample No.positive %(CI)
NuwaraEliya 83 6 7.2(3.4–14.9) ND – –
Polonnaruwa 84 8 9.5(4.9–17.7) 118 8 6.8(3.5–12.8)
Ampara 88 7 8.0(3.9–15.5) ND – –
Jaffna 61 3 4.9(1.7–13.5) ND – –
Mannar NDa – – 146 35 24.0(17.8–31.5)
Mullaitivu ND – – 56 8 14.3(7.4–25.7)
Total 316 24 7.6(5.2–11.1) 320 51 15.9(12.3–20.4)
aND,samplingwasnotdone. b95%confidenceinterval.
2.4. Statisticalanalysis
The 95% confidence intervals for the positive rates werecomputedusingtheopenepionlineprogram(http:// www.openepi.com/v37/Proportion/Proportion.htm), basedonthemethoddescribedbyWilson(1927).
3. Resultsanddiscussion
The diagnostic PCR assay revealed the presence of
T. theileri in the cattle and water buffaloes bred in all
the surveyed districts of Sri Lanka (Table 1). The
over-allT.theileri-positiveratewasrelativelyhigherinwater
buffaloes (15.9%) than in cattle (7.6%). However, the prevalences ofT. theileriamongwater buffaloesbred in Polonnaruwa and Mullaitivu didnot significantly differ fromthosedetermined forthecattlepopulationsinthe surveyeddistricts.On theotherhand,T.theileri-positive rateamongthewaterbuffaloesinMannarwassignificantly higher than those reported for the cattleand has con-tributedtothehigheroverallprevalenceinwaterbuffaloes incomparisontocattle.Therefore,itseemsthatT.theileri -positive rates in Sri Lanka might be influenced by the geographicallocation.TheMannardistrictischaracterized byhotandhumidclimate,andfurtherstudiesto investi-gatethepossibleeffectofdifferentclimaticconditionson thedistributionoftabanidfliesmightshedanadditional lightonthediscrepanciesbetweentheprevalencesofT.
theileriindifferentgeographicallocationswithinSriLanka.
AlthoughT.theileriisknowntoberelativelyless viru-lent,theparasitesometimesbecomestroublesomewhen presentinco-infectionswithotherpathogens(Mansfield, 1977;Wells,1976).Therefore,weanalyzedforpossible co-infectionsbasedontheBabesia(B.bovisandB.bigemina)
andTheileria(T.annulataandT.orientalis)infectiondata
obtainedfromthesameDNAsamplesinprevious inves-tigations(Sivakumaretal.,2012b,2014).In thepresent study,83.3%oftheT.theileri-positivecattleand86.3%ofthe
T.theileri-positivewaterbuffaloeswereco-infectedwith
Babesiaand/orTheileriaparasites(Table2).AmongtheT.
theileri-infectedcattle,10,5,4,and1wereco-infectedwith
one,two,three,andfourBabesiaand/orTheileriaspecies, respectively.Incontrast,outof44T.theileri-positivewater buffaloes that had co-infections, 43 had dual infections
with T. orientalis, while the remaining animal was
co-infectedwithB.bigeminaandT.orientalis.Thediscrepancies relatingtothedifferentco-infectionprofilesofthecattle
Table2
Co-infectionsofT.theileriwithBabesiaandTheileriaparasitesinSriLankan cattleandwaterbuffaloes. T.theileri+B.bigemina+T.orientalis 1 1 T.theileri+T.annulata+T.orientalis 1 ND 2parasites
T.theileri+T.orientalis 6 43
T.theileri+B.bigemina 4 ND
Total(%c) 20(83.3) 44(86.3)
aCo-infections were determined based on the Babesia (B. bovis
andB.bigemina)andTheileria(T.annulataandT.orientalis)infection dataobtainedfromthesameDNAsamplesinpreviousinvestigations (Sivakumaretal.,2012b,2014).
b ND,notdetected.
c ExpressedasapercentageofT.theileri-infectedanimals.
andwaterbuffaloesarecausedbydifferencesinthe posi-tiveratesofBabesiaandTheileriaspeciesbetweenthecattle andwaterbuffaloesinSriLanka(Sivakumaretal.,2012b, 2014).Nevertheless,thehighT.theilerico-infectionrates areofconcerninSriLanka.Therefore, further investiga-tionontheclinicalstatusofco-infectedanimalsisnowa priorityinthiscountry.
A total of 15 and 9 PCR amplicons from cattle and waterbuffaloes,respectively,wereclonedandsequenced. All the CATL gene fragments amplified in the present studywere289-bpin length,but highgeneticvariation wasfoundamongtheCATLsequences.Singlenucleotide polymorphisms were frequently detected, as shown in
Fig.1.Theidentityvaluesamongthecattle-derivedCATL
sequences(AB930145–AB930159)were89.6–99.7%,while the buffalo-derived sequences (AB930160–AB930168) exhibited 90.7–100% identity values. In contrast, the buffalo-derivedCATLsequenceshad88.2–100%sequence identity with those of cattle. Two cattle-derived CATL
Fig.1.PolymorphicsiteswithinT.theileriCATLgenesequencesisolatedfromcattleandwaterbuffaloesinSriLanka.TheCATLsequencesgeneratedinthe presentstudywereanalyzedbyDnaSPv5software(LibradoandRozas,2009)usingacattle-derivedsequence(AB930146)asareferencefordetermining thepolymorphicsiteswithinthe289nucleotidesamplifiedbythediagnosticPCRassay.CladesrefertothecladenamesinFig.2.Dotsdenotenucleotides thatareidenticaltothereferencesequence.NotethatthereishighgeneticdiversityamongtheSriLankanT.theileriCATLsequencesandthattwo buffalo-derivedsequences(AB930167andAB930168)sharehighsequenceidentityscoreswithtwocattle-derivedsequences(AB930146andAB930147)inclade ID.
99.3% identity values with a buffalo-derived sequence (AB930167), and these cattle-derived sequences also shared99.7%identitywithanothersequence(AB960168) derived from a Sri Lankan water buffalo. Similarly, a sequencefromcattle(AB930151)shareda highidentity score(97.9%)withbuffalo-derivedsequences(AB930161, AB930162,andAB930166).Geneticdiversitylevelsamong
theT.theileriCATLgenesequencesdetectedinSriLanka
areinagreementwiththoseofpreviousstudies,whichalso foundthatCATLsequencesarehighlydiverseamongT. thei-leriisolatesfromdifferentcountries(Garciaetal.,2011a,b; Rodriguesetal.,2006,2010).Severalpaststudieshave sug-gestedthattheT.theilerigenotypesthatinfectcattleand waterbuffaloesmightdifferfromeachother(Fisheretal., 2013;Garciaetal.,2011a,b;Rodriguesetal.,2006,2010). BasedonssrRNAandITSnucleotidesequences,Rodrigues et al. (2006) alsoshowed that the T. theileri genotypes fromBraziliancattleandwaterbuffaloesdifferedfromeach other.Inarecentstudy,whichusedseveralmarkergenes,
theT.theilerigenotypesobtainedweredescribedasbeing
host-specificinBrazilandVenezuela(Garciaetal.,2011b). Tothebestofourknowledge,therefore,ourstudyisthefirst toreporthighlevelsofsequenceidentityamongdirectly PCR-amplifiedCATLDNAsequencesofT.theilerifromcattle andwaterbuffaloes.
In the phylogenetic tree, the CATL sequences deter-mined in the present study were found in multiple clades(Fig.2).Althoughmostofthecattle-and buffalo-derived sequences clustered independently, a few CATL
sequences from water buffaloes (AB930167, AB930168, and AB930162) clustered together with the cattle sequences.Thesefindingsareconsistentwiththe sequenc-ingdataanalysisdescribed above.Wealsofoundthata Braziliansequence(HQ664735)fromwaterbuffaloshared 100 and 99.6% identity values with a buffalo-derived
sequence (AB930162) from Sri Lanka and with two cattle-derivedsequences(HQ543073andHQ543074)from Thailand,respectively.Althoughtheseresultsquestionthe hostspecificityofT.theileriCATLvariantsincattleand buf-faloesfromSriLanka,thefindingsmightbeinconclusive asonly thepartialCATLgene fragmentswereanalyzed. Ontheotherhand,researchershaveusedseveraldifferent markergenes toinvestigategenetic diversityin T. thei-leri inthe recentpast (Fisher etal., 2013;Garcia et al., 2011a,b; Rodrigues et al., 2006, 2010). In an extensive studyusinglargeDNAdatasetgeneratedfromcultured
T.theileriisolates,Garciaetal.(2011b)demonstratedthe
highconcordancebetweenthegenotypesofseveral geno-typicmakers,suchasthessrRNA,ITS1,Cytb,SL,gGAPDH, andCATLgenes,andfoundthatthegenotypeswere host-specific.However,ourpresentstudyexaminedonlythe DNAsamplesextractedfromthehostbloodandanalyzed the geneticvariations based onpartialCATL sequences. Therefore,thepresentfindingsmaynotallowustoreacha conclusionregardingthehost-specificityofT.theileri geno-typesinSriLanka.
Apreviousstudydemonstratedthatthetabanidflies canharbordiversegeneticvariantsofT.theileriatagiven time(Rodriguesetal.,2006).Therefore,theT.theileri geno-typesincattlecouldhavebeentransmittedtothewater buffaloesinSriLanka,asboththehostanimalsareusedto beinclosecontactwitheachother,especiallyduring graz-ing,inthesampledlocations.However,althoughdifferent
T.theilerigenotypesaretransmittedtothehostanimals,
etal.,2008).Therefore,thepresentfindings,whichshowed that someof thewater buffalo-derived CATLsequences sharedsimilarity to cattle-derived sequences,might be duetoyetunestablishedinfectionswithdifferent geno-typesinthesehostanimals.Sothat,thedetectionofCATL
sequencesthatsharesimilaritybetweencattleandwater buffaloesinthepresentstudydoesnotnecessarilymean thattheseCATL variantslack host-specificity.Therefore, futurestudiesin SriLankashouldanalyzea large num-berofsequencesbelongingtoseveralgenotypic marker genesusingculturedT.theileriisolatesfromdifferenthost animals.Nevertheless,thepresentfindingsareusefulfor furtheringourunderstandingoftherelationshipbetween
T.theilerigenotypesandhost-specificity.Inconclusion,in
additiontoreportingthefirstPCR-basedsurveyofT. thei-leri,thepresentstudyfoundevidencethatsomeT.theileri
CATLDNAsequencesobtainedfromnaturallyinfected cat-tleandwaterbuffaloesinSriLankamaybesharedamong thesehosts.
Conflictofintereststatement
Theauthorshavenoconflictsofinterestconcerningthe workreportedinthispaper.
Acknowledgments
WethankthestaffoftheSriLankancattleandwater buffalo farms and at the Veterinary Research Institute, DepartmentofAnimalProductionandHealth,Peradeniya, SriLankafortheirkindcooperation.We alsothankMs. Hiroko Yamamoto (National Research Center for Pro-tozoan Diseases, Obihiro University of Agriculture and VeterinaryMedicine), Mr.H. Maithripala and Mr.H. A. Wijithasiri(VeterinaryResearchInstitute,Departmentof AnimalProductionandHealth,Peradeniya,SriLanka)for theirexcellenttechnicalassistance.Thisstudywas sup-portedbya grantfromtheJapanSocietyfor Promotion ofScience(JSPS)Grant-in-AidforScientificResearch(JSPS KAKENHINumber26257417).
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