Rates of appropriate treatment and follow-up testing after a gonorrhea and/or chlamydia infection in an urban network of federally qualified health center systems
Laura McWhirter, Yingbo Lou, Sarah Reingold, Sarah Warsh, Tara Thomas-Gale, Christine Haynes, Deborah Rinehart, Karen A. Wendel, Holly M. Frost
Supplementary Tables
Supplemental Table 1: Electronic health record (EPIC, Verona, WI) fields used for electronic abstraction of data.
Factora Data Acquisition
Substance Use History Social History-Substance Use (Collected by medical assistants at each visit)
Adolescent and Title X Note Macros (Assessed by providers at all wellness visits and family planning visits) Encounter ICD10CM
Alcohol History Social History- Alcohol Use
Adolescent Note Macro Encounter ICD10CM
Sexual Orientation (ever) Social History-Sexually Orientation (Collected by medical assistants at each visit)
Adolescent and Title X Note Macros (Assessed by providers at all wellness visits and family planning visits)
Sexual Activity Social History-Sexually Active
Adolescent and Title X Note Macros Internal Prenatal Registry
Laboratory Data- Positive Pregnancy Test Prescription Data
Encounter ICD10CM
Condom Use Social History- Birth Control (Collected by medical
assistants at each visit)
Adolescent and Title X Note Macros (Assessed by providers at all wellness visits and family planning visits)
Pregnancy History (ever) Encounter ICD10CM
Internal Prenatal Registry
Laboratory Data- Positive Pregnancy Test
Anxiety History ICD10CM
Depression History ICD10CM
Gonorrhea and Chlamydia Testing CPT Codes: 87591
Human Immunodeficiency Virus Testing CPT Codes: 86689, 86701, 86702, 86703, 87389, 87534, 87535, 87536, 87537, 87538, 87539
Syphilis Testing CPT Codes: 86780, 86593, 86780, 86592
a Unless otherwise indicated clinical factors were determined for the date of the index episode or within 1 year prior.
Supplementary Table 2: Appropriate antibiotic therapy for gonorrhea and chlamydia infections based on CDC- recommended treatment
a,b,cAntibiotic therapy for gonorrhea
infection Antibiotic therapy for chlamydia
infection Ceftriaxone and Azithromycin Azithromycin Cefixime and Azithromycin Doxycycline Gentamicin and Azithromycin
Ceftriaxone and Doxycycline Cefixime and Doxycycline Cefpodoxime and Azithromycin
a Workowski KA, Bolan GA; CDC. Sexually transmitted diseases treatment guidelines, 2015. MMWR Recomm Rep 2015;64(No. RR-3).
bWorkowski KA, Bachmann LH, Chan PA, et al.. Sexually transmitted infections treatment guidelines, 2021. MMWR Morb Mortal Wkly Rep. 2021;70(4):1-187
c First-line treatment recommendations changed after the study period for chlamydia.
Supplementary Table 3: Factors associated with receipt of antibiotic treatment within 14 days of positive lab result
Gonorrhea Chlamydia
Factor Unadjusted OR
(95% CI) P Adjusted OR
(95%CI) P Unadjusted OR
(95% CI) P Adjusted OR (95%
CI) P
Age 1.09 (0.99, 1.21) 0.09 1.13 (1.00, 1.27) 0.05 1.06 (1.00, 1.11) 0.03 1.05 (0.99, 1.12) 0.08 Gender-Male 2.04 (0.97, 4.27) 0.06 2.00 (0.93, 4.30) 0.07 1.17 (0.83, 1.65) 0.37 1.16 (0.81, 1.66) 0.43 Race
White Reference Reference Reference Reference
Black 1.15 (0.52, 2.53) 0.66 1.20 (0.52, 2.77) 0.67 0.86 (0.55, 1.32) 0.63 0.89 (0.57, 1.39) 0.61 Other 0.71 (0.22, 2.24) 0.34 0.67 (0.20, 2.28) 0.52 0.98 (0.49, 1.94) 0.79 0.97 (0.49, 1.95) 0.94 Ethnicity- Hispanic 1.38 (0.66, 2.87) 0.19 1.42 (0.65, 3.06) 0.38 0.84 (0.58, 1.22) 0.47 0.90 (0.61, 1.32) 0.59 Preferred Language
Non-English Reference Reference Reference Reference
English 0.37 (0.11, 1.23) 0.11 0.37 (0.11, 1.26) 0.11 0.87 (0.59, 1.28) 0.47 0.86 (0.58, 1.28) 0.45 Insurance
Public/Medicaid Reference Reference Reference Reference
Commercial 0.89 (0.35, 2.23) 0.90 0.87 (0.33, 2.28) 0.77 1.56 (0.96, 2.53) 0.06 1.33 (0.80, 2.19) 0.27 Self-pay 0.70 (0.37, 1.33) 0.42 0.64 (0.32, 1.26) 0.20 0.95 (0.69, 1.31) 0.15 0.84 (0.61, 1.17) 0.31 History of alcohol use 0.74 (0.16, 3.45) 0.70 0.88 (0.17, 4.58) 0.88 1.06 (0.41, 2.73) 0.90 1.06 (0.41, 2.76) 0.91 History of tobacco use 1.16 (0.47, 2.84) 0.74 1.07 (0.40, 2.86) 0.90 0.74 (0.45, 1.20) 0.22 0.74 (0.44, 1.26) 0.27 History of anxiety/
depression 0.96 (0.49, 1.89) 0.91 1.09 (0.53, 2.27) 0.81 0.77 (0.54, 1.11) 0.16 0.82 (0.56, 1.19) 0.30 Sexual orientation-
LGBTQ+ 0.79 (0.40, 1.56) 0.49 1.06 (0.51, 2.19) 0.87 1.00 (0.67, 1.50) 0.99 1.06 (0.70, 1.62) 0.78 Documented condom
use 1.12 (0.65, 1.91) 0.69 1.25 (0.70, 2.24) 0.45 1.26 (0.97, 1.63) 0.08 1.44 (1.09, 1.90) 0.01 Prior history of
chlamydia 0.77 (0.41, 1.44) 0.41 0.68 (0.34, 1.37) 0.28 0.87 (0.58, 1.31) 0.51 0.91 (0.59, 1.42) 0.69 Prior history of
gonorrhea 1.59 (0.36, 6.98) 0.54 1.60 (0.33, 7.84) 0.56 0.81 (0.39, 1.66) 0.56 0.85 (0.39, 1.87) 0.69 History of syphilisa <0.001 (0.00, >100) 0.99 - - 0.14 (0.04, 0.57) 0.01 0.16 (0.04, 0.71) 0.02 Testing location
Non-pediatric setting Reference Reference Reference Reference
Pediatric clinic 0.92 (0.43, 1.96) 0.82 1.01 (0.43, 2.38) 0.98 0.61 (0.44, 0.85) 0.00 0.66 (0.46, 0.94) 0.02
aNot included in multivariable model given low number of cases
Supplementary Table 4: Factors associated with HIV and syphilis testing following a positive gonorrhea test
Factor HIV Syphilis
Unadjusted OR (95% CI)
P Adjusted OR (95% CI)
P Unadjusted OR (95% CI)
P Adjusted OR (95% CI)
P Age 1.10 (1.02, 1.18) 0.01 1.12 (1.03, 1.22) 0.01 1.08 (1.00, 1.15) 0.04 1.10 (1.01, 1.19) 0.03 Gender - male 0.91 (0.60, 1.39) 0.67 0.77 (0.49, 1.22) 0.27 0.71 (0.47, 1.09) 0.12 0.61 (0.38, 0.95) 0.03 Race/Ethnicity
White Reference Reference Reference Reference
Black 1.19 (0.68, 2.08) 0.31 1.40 (0.76, 2.56) 0.28 1.37 (0.79, 2.39) 0.08 1.64 (0.90, 3.00) 0.11 Hispanic 1.28 (0.76, 2.13) 0.12 1.61 (0.93, 2.79) 0.09 1.29 (0.78, 2.14) 0.11 1.65 (0.95, 2.85) 0.07 Other 0.64 (0.26, 1.59) 0.16 0.76 (0.29, 1.97) 0.57 0.56 (0.22, 1.42) 0.08 0.64 (0.24, 1.69) 0.36 Primary Language
Non-English Reference Reference Reference Reference
English 1.42 (0.80, 2.51) 0.23 1.35 (0.74, 2.47) 0.33 1.40 (0.79, 2.48) 0.25 1.22 (0.67, 2.23) 0.51 Insurance
Public Reference Reference Reference Reference
Private 1.11 (0.59, 2.09) 0.97 1.04 (0.53, 2.05) 0.91 1.17 (0.62, 2.19) 0.7 1.19 (0.61, 2.33) 0.61 Other 1.20 (0.75, 1.93) 0.62 1.18 (0.71, 1.94) 0.52 1.06 (0.67, 1.69) 0.95 1.10 (0.67, 1.79) 0.71 History of alcohol use 1.43 (0.42, 4.80) 0.57 1.87 (0.50, 6.91) 0.35 1.17 (0.37, 3.74) 0.79 1.48 (0.43, 5.17) 0.54 History of tobacco use 1.05 (0.58, 1.89) 0.87 0.74 (0.38, 1.44) 0.38 1.26 (0.70, 2.26) 0.44 0.95 (0.49, 1.85) 0.89 History of anxiety/
depression 0.62 (0.39, 0.98) 0.04 0.54 (0.33, 0.89) 0.02 0.71 (0.45, 1.13) 0.15 0.60 (0.37, 0.99) 0.05 Sexual orientation
LGBTQ+
1.02 (0.62, 1.67) 0.94 1.15 (0.68, 1.97) 0.6 1.24 (0.76, 2.02) 0.4 1.35 (0.79, 2.31) 0.27 Documented condom use 1.30 (0.90, 1.88) 0.16 1.49 (0.99, 2.24) 0.06 1.26 (0.87, 1.81) 0.22 1.39 (0.93, 2.09) 0.11 History of chlamydia 1.19 (0.75, 1.87) 0.46 0.93 (0.55, 1.56) 0.77 1.24 (0.79, 1.94) 0.36 0.90 (0.54, 1.52) 0.71 History of gonorrhea 3.53 (1.18, 10.54) 0.02 3.28 (0.98, 10.96) 0.05 4.18 (1.40, 12.48) 0.01 3.73 (1.12, 2.37) 0.03 Testing location
Non-pediatric setting Reference Reference Reference Reference
Pediatric clinic 0.74 (0.44, 1.26) 0.27 0.92 (0.51, 1.67) 0.78 0.90 (0.53, 1.52) 0.69 1.06 (0.59, 1.93) 0.84
Supplementary Table 5: Factors associated with HIV and syphilis testing following a positive chlamydia test
Factor HIV Syphilis
Unadjusted OR (95% CI)
P Adjusted OR (95%
CI)
P Unadjusted OR (95% CI)
P Adjusted OR (95% CI)
P Age 1.07 (1.04, 1.11) <.001 1.10 (1.06, 1.14) <.001 1.06 (1.02, 1.09) <.001 1.08 (1.04, 1.12) <.001 Gender - male 1.30 (1.04, 1.62) 0.02 1.35 (1.07, 1.70) 0.01 1.10 (0.88, 1.36) 0.42 1.11 (0.89, 1.40) 0.36 Race/Ethnicity
White (baseline) Reference Reference Reference Reference
Black 1.18 (0.89, 1.57) 0.28 1.20 (0.89, 1.60) 0.23 1.21 (0.91, 1.60) 0.35 1.24 (0.93, 1.66) 0.14 Hispanic 1.12 (0.88, 1.42) 0.54 1.17 (0.92, 1.49) 0.21 1.12 (0.89, 1.43) 0.82 1.17 (0.92, 1.50) 0.2 Other 0.99 (0.64, 1.53) 0.61 0.96 (0.62, 1.50) 0.87 1.10 (0.71, 1.71) 0.98 1.09 (0.70, 1.69) 0.72 Primary Language
Non-English Reference Reference Reference Reference
English 1.15 (0.90, 1.48) 0.26 1.08 (0.84, 1.40) 0.55 1.11 (0.86, 1.42) 0.43 1.04 (0.80, 1.34) 0.79 Insurance
Public (baseline) Reference Reference Reference Reference
Private 1.16 (0.88, 1.54) 0.29 1.04 (0.78, 1.40) 0.77 1.11 (0.84, 1.46) 0.63 1.04 (0.78, 1.39) 0.78 Other 0.99 (0.80, 1.24) 0.5 1.03 (0.82, 1.29) 0.83 1.07 (0.86, 1.33) 0.89 1.13 (0.90, 1.41) 0.29 History of alcohol use 1.30 (0.70, 2.42) 0.41 1.13 (0.60, 2.14) 0.7 1.15 (0.62, 2.12) 0.65 1.02 (0.55, 1.91) 0.94 History of tobacco use 1.56 (1.08, 2.26) 0.02 1.25 (0.85, 1.83) 0.26 1.53 (1.07, 2.19) 0.02 1.27 (0.87, 1.84) 0.22 History of anxiety/
depression 1.26 (0.97, 1.63) 0.08 1.27 (0.97, 1.66) 0.08 1.20 (0.93, 1.56) 0.15 1.19 (0.91, 1.55) 0.19 Sexual orientation
LGBTQ+
1.16 (0.89, 1.52) 0.28 1.28 (0.96, 1.69) 0.09 1.21 (0.92, 1.59) 0.17 1.29 (0.98, 1.70) 0.07 Documented condom
use 1.12 (0.94, 1.33) 0.22 1.20 (1.00, 1.45) 0.05 1.06 (0.89, 1.26) 0.51 1.12 (0.93, 1.34) 0.24 History of chlamydia 1.13 (0.85, 1.49) 0.4 0.99 (0.73, 1.33) 0.94 1.16 (0.88, 1.53) 0.29 1.03 (0.77, 1.39) 0.84 History of gonorrhea 1.54 (0.90, 2.62) 0.11 1.37 (0.78, 2.41) 0.28 1.48 (0.88, 2.49) 0.14 1.33 (0.76, 2.31) 0.31 History of syphilis 1.47 (0.35, 6.16) 0.6 1.23 (0.28, 5.39) 0.79 1.74 (0.42, 7.32) 0.45 1.49 (0.34, 6.53) 0.6 Testing location
Non-pediatric setting Reference Reference Reference Reference
Pediatric clinic 1.00 (0.79, 1.27) 0.99 1.22 (0.94, 1.58) 0.14 1.15 (0.91, 1.46) 0.25 1.40 (1.08, 1.82) 0.01
Supplementary Table 6: Factors associated with gonorrhea and chlamydia retesting within 60 days-6 months following a positive gonorrhea test
Factor Unadjusted OR
(95% CI) P Adjusted OR
(95% CI) P
Age 0.94 (0.88, 1.01) 0.11 0.93 (0.86, 1.02) 0.12
Gender - male 0.22 (0.13, 0.36) <.001 0.19 (0.11, 0.33) <.001 Race/Ethnicity
White Reference Reference
Black 1.46 (0.83, 2.57) 0.17 1.42 (0.76, 2.65) 0.27
Hispanic 1.25 (0.74, 2.10) 0.58 1.26 (0.72, 2.23) 0.42
Other 0.94 (0.37, 2.38) 0.54 0.87 (0.32, 2.36) 0.79
Primary Language
Non-English Reference Reference
English 1.26 (0.70, 2.27) 0.44 1.16 (0.61, 2.21) 0.66 Insurance
Public Reference Reference
Private 0.73 (0.38, 1.38) 0.78 0.90 (0.45, 1.81) 0.77
Other 0.64 (0.40, 1.03) 0.29 0.66 (0.39, 1.12) 0.13
History of alcohol use 0.44 (0.12, 1.64) 0.22 0.36 (0.09, 1.46) 0.15 History of tobacco use 1.28 (0.72, 2.28) 0.41 1.47 (0.75, 2.85) 0.26 History of anxiety/
depression 1.03 (0.65, 1.64) 0.89 0.78 (0.47, 1.29) 0.33 Sexual orientation
LGBTQ+ 1.11 (0.68, 1.81) 0.67 0.98 (0.57, 1.69) 0.95
Documented condom use 1.11 (0.77, 1.61) 0.56 1.27 (0.84, 1.93) 0.26 History of chlamydia 1.21 (0.77, 1.89) 0.41 1.08 (0.63, 1.84) 0.78 History of gonorrhea 1.80 (0.77, 4.18) 0.17 1.36 (0.51, 3.67) 0.54 Testing location
Non-pediatric setting Reference Reference
Pediatric clinic 1.18 (0.70, 1.99) 0.54 0.93 (0.50, 1.72) 0.82
Supplementary Table 7: Factors associated with gonorrhea and chlamydia retesting within 60 days-6 months following a positive chlamydia test
Factor Unadjusted OR (95%
CI) P Adjusted OR (95%
CI) P
Age 0.94 (0.91, 0.97) <.001 0.94 (0.91, 0.98) <.001
Gender - male 0.33 (0.25, 0.43) <.001 0.30 (0.23, 0.39) <.001 Race/Ethnicity
White Reference Reference
Black 1.09 (0.81, 1.45) 0.11 1.12 (0.83, 1.52) 0.45
Hispanic 1.11 (0.87, 1.42) 0.03 1.07 (0.82, 1.38) 0.63
Other 0.63 (0.39, 1.01) 0.02 0.62 (0.38, 1.02) 0.06
Primary Language
Non-English Reference Reference
English 0.96 (0.75, 1.24) 0.78 0.93 (0.71, 1.21) 0.58
Insurance
Public Reference Reference
Private 0.83 (0.62, 1.11) 0.32 1.06 (0.78, 1.44) 0.71
Other 0.92 (0.74, 1.16) 0.91 0.98 (0.77, 1.24) 0.86
History of alcohol use 1.06 (0.57, 1.97) 0.86 1.02 (0.53, 1.95) 0.95 History of tobacco use 1.17 (0.82, 1.67) 0.39 1.30 (0.88, 1.90) 0.18 History of anxiety/ depression 1.61 (1.24, 2.08) <.001 1.39 (1.06, 1.81) 0.02 Sexual orientation LGBTQ+ 1.18 (0.90, 1.55) 0.24 0.93 (0.70, 1.24) 0.62 Documented condom use 1.51 (1.26, 1.80) <.001 1.56 (1.28, 1.89) <.001 History of chlamydia 1.04 (0.79, 1.39) 0.77 0.93 (0.68, 1.27) 0.66 History of gonorrhea 0.83 (0.49, 1.42) 0.5 0.73 (0.41, 1.31) 0.3 History of syphilis 0.93 (0.22, 3.91) 0.92 0.84 (0.19, 3.67) 0.82 Testing location
Non-pediatric setting Reference Reference
Pediatric clinic 1.05 (0.82, 1.34) 0.69 0.92 (0.70, 1.22) 0.57
Supplemental Table 8: Rates of laboratory follow-up for patients with chlamydia treated on the same day as the test vs.
between 2-14 days after testing.
Same day
N (%) 2-14 days
N (%) Pa
HIV No 317 (47.7) 522 (43.8) 0.11
Yes 347 (52.3) 668 (56.1)
GC/CTb No 450 (67.8) 663 (55.7) <0.01
Yes 214 (28.9) 527 (44.3)
Syphilis No 353 (53.2) 565 (47.5) 0.02
Yes 311 (46.8) 625 (52.5)
a Chi-squared test, significance defined as p<0.05.
b Gonorrhea and chlamydia retest between 60 days to 6 months after infection.
Supplemental Table 9: Rates of laboratory follow-up for patients with gonorrhea treated on the same day as the test vs.
between 2-14 days after testing.
Same day
N (%) 2-14 days
N (%) Pa
HIV No 317 (46.0) 522 (35.4) 0.03
Yes 347 (54.0) 668 (64.6)
GC/CTb No 102 (68.0) 137 (50.6) <0.01
Yes 48 (32.0) 134 (49.4)
Syphilis No 82 (54.7) 99 (36.5) <0.01
Yes 68 (45.3) 172 (63.5)
a Chi-squared test, significance defined as p<0.05.
b Gonorrhea and chlamydia retest between 60 days to 6 months after infection.