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Benzimidazole and Benzothiazole Based Chemosensors For Biologically Important Analytes

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In the presence of Zn2+, the colorless solution of the chemosensor shows a strong greenish fluorescence, thus enabling the detection of the metal with the naked eye. A hand-made paper test also describes the potential utility of L4 in detecting PPi.

Contents

C hapter 1- Introduction

1 Design and synthesis of fluorescent chemosensors for sensing cations and an anions

C hapter 2- Experimental Methods and Characterization

C hapter 3

C hapter 4

C hapter 5

Benzothiazole Functionalized Sensor for Zn(II) and PPi: Nano-molar sensing in Physiological condition and in Live Cells

C hapter 6

Benzimidazole Functionalized Sensor for PPi: Aggregation-Induced Metal- Free Chemosensing Platform

C hapter 1

Advantages of fluorescence based assays

This technique is based on an interesting property known as the 'Stokes Shift' which states that the position of the output emission is always at a higher wavelength than the excitation spectrum.13 One of the first scientific reports describing the uses of luminescence as a analytical tool. was Harvey in 1923.14 However, chemosensing using fluorescence to signal a molecular recognition event was first demonstrated in the early 1980s, when Tsien et al.

Receptor design and its essential properties

  • Why benzimidazole or benzothiazole?

Thus, together with the right binding groups, the right choices of fluorophores and detection technique are essential for the desired photophysical behavior of the chemosensor. More interestingly, active sites of most metalloproteins contain an imidazole ring of histidine residue.35 The acidity of the NH proton of the imidazole can be tuned with appropriate substitutions on the imidazole ring for anion binding.

Types of reaction mechanisms in the sensing event

  • Direct complexation: In this strategy, the binding unit and the signaling unit (reporter) are covalently linked, and the resulting probes could directly form supramolecular complexes with
    • Fluorescent chemosensors for metal ions
    • Chemosensors for anions

The benzimidazole core is the signaling unit in this event that also determines the selectivity of the chemosensor. Due to the obvious affinity of the anion for a cation, a metal chemosensor ensemble can counteract this problem.

C hapter 2

General Information and Materials

Synthesis and characterization of the compounds

  • Synthesis of L 2C [(E)-2-(2-(naphthalen-1-ylmethylene)hydrazinyl)benzo[d]thiazole]

It gives a yellowish precipitate which is then washed with cold ethanol to give pure L2C in 70% yield. Condensation of freshly prepared 2,6-diformyl-4-methylphenol1 with 2-hydrazinobenzothiazole for 4 h gave a yellowish precipitate, which was then filtered and washed with cold methanol to give pure L3 (Scheme 5.1).

X-Ray crystallography

Perchlorate or nitrate salts are used for metal ions while tetrabutyl/tetraethyl or sodium salts of the corresponding anions and nucleotides are used to prepare anion stock solutions. For titration experiments, a 1 × 10-3 M solution of the chemosensor taken in a 1 cm optical path length quartz optical cell is titrated with increasing concentration of cation/anion stock solutions in the experimental medium.

Evaluation of the Apparent Binding Constant

For the competitive selectivity experiment, the fluorescence emission from the chemosensor-sensed guest ensemble is collected in the absence and presence of the competitive ions in excess (10 equivalents). I0 is the fluorescence emission intensity of the host at emission maximum (λmax), I is the observed emission at that specific wavelength in the presence of a given concentration of the analyte (C), Imax is the maximum emission value obtained at λmax during titration with varying analyte concentration, K is the apparent binding constant (M−1) and is determined from the slope of the linear graph.

Finding the Detection Limit

Sensing of Zn(II) in Physiological Milieu

Detection of Intracellular Zn 2+ and PPi by Imaging

DLS experiments are performed with an optically clear solution of L4 (10 µM) in water in the presence of 10 equivalents of PPi ion. Atomic force microscope images are captured with an Agilent 5500 AFM (Agilent Technologies, Chandler, AZ, USA).

Background and focus of the chapter

The new chemosensor L1 exhibits highly selective and sensitive “on” fluorescence response to Zn2+ ion only in the NIR region. Although a large number of synthetic receptors report sensing of Zn2+ ion, synthetically simple chemosensors with “turn-on” fluorescence emission in the NIR region are very limited.17,18 Again, ninhydrin is known for its widespread applications in biochemical fields. , analytical and forensic works.

Designing aspects of the chemosensor (L 1 )

Dihydrogen phosphate plays a major role in signal transduction, energy storage, and backbone construction of DNA and RNA.10-11 However, to date, fluorescent-based chemosensors for the H2PO4- ion are very limited and they respond to the aforementioned anion either by increasing or quenching the fluorescence emission.12-13. A short C—H--- π interaction (2.665 Å) from the quinoxaline to the benzothiazole group further extends such interactions in other directions.

In order to understand the changes induced by Zn2+, we also titrate the acetonitrile solution L1 (10 µM) with increasing concentrations of Zn2+ in the same experimental medium. Inset: Visual color changes upon addition of Cu2+ and Zn2+ to acetonitrile solution L1.

This also leads to a visual change in the color of the solution from light yellow to light pink. In the following, changes in the fluorescence of the chemosensor with the same set of metal ions are also tested.

Binding Mode and Composition of Metal Complex

However, this could be useful for fluorescence-based detection of the same, since the fluorescence response of the Cu2+ ion to L1 was not seen first. However, under similar experimental conditions, the interaction of S2- with the 'L1-Zn2+' ensemble did not result in a change in the fluorescence output signal (Figure A3.5b).

As evidenced by the high selectivity of the group 'L1-Zn2+' for H2PO4-, all other anions are also insensitive to the absorption spectra of the group. Absorption titration spectra (Figure 3.6b) showed a consistent decrease in the absorbance of the peak at 536 nm with increasing concentrations of H2PO4-.

Background and Focus of the Chapter

Furthermore, the OH group is expected to increase the number of binding sites as well as the water solubility of the chemosensor, which is crucial for a realistic application of the chemosensor.

UV −−−− Vis Spectroscopic Studies Based Metal ions Sensing Aptitude of L 2

These titration spectra explain a linear improvement in the emission intensity of L2 at 510 nm with the gradual increase in concentrations of Zn2+ and Cd2+ ions (Figure 4.3a and A4.1b). Again, the intracellular Zn2+ sensing behavior of L2 will not be disturbed by Cd2+ due to its extremely low intracellular concentration level.

NMR Binding study

Again, the fluorescence emission intensity also increases with the addition of Zn2+ to the already blooming Cd2+ added L2 solution. Importantly, higher concentrations (1 mM) of Ca2+, Mg2+, Na+ and K+ which generally coexist with Zn2+ in biological systems did not interfere with Zn2+ sensitivity under the same physiological conditions.

Furthermore, the plot of fluorescence emission intensity at 510 nm against the number of equivalents of guest anions (H2PO4- and PPi) presents an almost straight line after 2 equivalents of H2PO4- and PPi (Figure A4.8b). Furthermore, to understand the reason for the fluorescence quenching of the ensemble towards P2O74- and H2PO4-.

Further, to understand the sensitivity of the ensemble in the detection of PPi and H2PO4-, the fluorescence of the ensembles is also recorded in a mixed anionic medium where all anions are also present. -Changes of solutions are also recorded. ii) Energy diagrams of the HOMO and LUMO orbitals of L2 and the ('N'-coordinated) L2-Zn2+ complex calculated at the DFT level using a B3LYP/6-31+G(d,p) basis set.

Theoretical Calculations

The optimized geometry and the highest occupied molecular orbital (HOMO) and the lowest unoccupied molecular orbital (LUMO) of L2 and its Zn2+ complexes are presented in Figure 4. There is a small lowering in the HOMO to LUMO energy gap of L2 to its Zn2+ complex, which likely aids the small red shift in the fluorescence spectra of L2.

Reversible Binding and Interpretation of Related Logic Gates

On the other hand, Zn2+ itself significantly increases the fluorescence, and the output signal is read as "1" and the gate is ON. However, when both inputs were present together, the output was "0" and the gate was OFF.

Paper Strip with Zn 2+

Conclusion

Intensity versus concentration (molar) plots for LOD calculations of c) PPi and f) H2PO4- with 'L2-Zn2+' ensembles.

Background and Focus of the Chapter

Selective Sensing of Zn(II) in Aqueous Medium by L 3

With increasing concentrations of Zn2+ there is a systematic enhancement of the fluorescence emission at 510 nm. After addition of 0.1 equivalent of Zn2+ (1.0 µM Zn2+), there is almost a 26-fold increase in the fluorescence intensity of the probe (Figure 5.3a).

Change of fluorescence emission intensity of the 'L3-Zn2+' ensemble at 510 nm with increasing concentrations of PPi. This indicates the high selectivity of the L3-Zn2+ ensemble for the PPI ion in the physiological pH.

Fabrication of logic gates with Zn 2+ and PPi as inputs

Similar to the results obtained with L3, HeLa cells treated with L3-Zn2+ and L3-Zn2+-PPi ensembles also showed significant viability, indicating a high biocompatibility of the assemblies. Therefore, to determine the potential of L3 in intracellular Zn2+ sensing, HeLa cells were incubated with 15 µM L3 followed by 30 µM Zn(ClO4)2 to induce formation of the intracellular L3-Zn2+ complex.

Conclusions

Interestingly, subsequent incubation of the cells with excess PPi resulted in a dramatic loss of fluorescence (Figure 5.8), perhaps originating from the fluorescence quenching behavior of PPi on the L3-Zn2+ ensemble as shown from previous solution-based studies (Figure 5.6).

Background and focus of the chapter

They coined the process ``aggregation-induced emission'' (AIE), which is now one of the most cited techniques in the sensing world. The biggest advantage of this process is the constructive role of the most common solvent water.3-4.

Design principle

Thus, appropriately designed chemosensors that are insoluble in water can be aggregated in water in a manner that provides AIE. To this end, a dipodal benzimidazole-functionalized sensor was developed, which is AIE-active and could directly detect pyrophosphate (PPi) without any metal mediator through an enhanced "on" fluorescence emission.

AIE phenomenon

Additionally, a slight green fluorescence of the solution is visible under a 365 nm UV lamp (Figure 6.1b, inset). Then, the THF solution of L4 is spotted on a filter paper and a drop of water is added to one of the spots.

Anion sensing aptitude of L 4

Systematic increase in the change in L4 fluorescence emission intensity with increasing PPi concentrations (λex = 430 nm, 2/2 nm gap). Interestingly, none of the previously mentioned anions causes a significant change in the intensity of the fluorescence emission of L4 (Figure A6.5).

Paper strip based detection of PPi

As expected, upon addition of Ca2+, the solution became colorless and the fluorescence decreased significantly, implying the involvement of PPi in the enhancement of fluorescence emission (Figure A6.8). This suggests that addition of PPi will lead to the generation of relatively larger aggregates in aqueous medium.

Detection of intracellular PPi by imaging

Interestingly, even at very high concentrations of probe or probe-PPi complex (60 µM), cell viability is as high as 80% (Figure A6.11). These results indicate that the L4 probe facilitates the detection of the inherent levels of PPi present in the cell.

Conclusion

Considering the non-toxic nature of L4 as well as L4-PPi ensemble, it is envisaged that the probe can be used for the detection of intracellular PPi through imaging studies. Addition of PPi anion facilitates the aggregation of L4's molecules and thereby increases the fluorescence emission through a process known as aggregation induce emission (AIE).

Abhijit Gogoi

Academic Summary

Research Interests

Expertise

Honours and awards

NIR sensing of Zn(II) and subsequent dihydrogen phosphate detection by a benzothiazole-functionalized ninhydrin-based receptor. Nanomolar Zn(II) sensing and subsequent PPi detection in physiological medium and living cells with a benzothiazole-functionalized chemosensor.

Poster Presentation Publications

Referensi

Dokumen terkait

9 List of Abbreviations SID : Strong Ion Differences SID3/4/5, the subscript means the number of ion used to calculate strong ion differences Atot : Total plasma concentration of