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chemical synthesis of 1,6-dioxygenated xanthones and

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Nguyễn Gia Hào

Academic year: 2023

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I certify that this project report entitled “CHEMICAL SYNTHESIS OF 1,6- OXYGENATED XANTHONES AND THEIR CYTOTOXIC ACTIVITIES”. Reaction mechanism involved in the synthesis of 1-(3-Methyl-.but-2-enyloxy)-6-(3-methyl-but-2-enyloxy)-xanthen-9-one.

Background

These xanthonic compounds show interesting biological activities and pharmacological interest related to their tricyclic scaffold, depending on the nature and the position of different substituents (Pinto et al., 2005). The great interest in xanthones is mainly due to their abundance in nature and also their significant biological properties such as anti-microbial activities (Bennet et al., 1989), anti-thrombotic (Lin et al., 1996a), anti-inflammatory ( Lin et al., 1996b ), cytotoxic and anti-tumor properties ( Pedro et al., 2002b ; Yoshimi et al., 2001 ).

Figure 1.1: Basic skeleton of xanthone
Figure 1.1: Basic skeleton of xanthone

Distribution of Xanthones in Nature

Therefore, chemical synthesis of xanthones is established to expand the possibilities of having different natures and positions of the substituents on the xanthone nucleus. The type and position of the substituents attached to the ring determine the specific properties of the xanthones (Vennetier, 2009).

Prenylated Xanthones

Epoxide appears to play an important role in the biological action, as the ring-opened epoxide xanthones lost some of their cytotoxic activities (Lin et al., 1996c). While the oxygenation pattern of these derivatives plays an important role in their biological activity, the presence of the prenyl side chains also appears to enhance the interaction with biological membranes compared to their nonprenylated analogs (Epifano et al., 2007).

Current Anticancer Drug Development

For example, methotrexate, hydroxyurea, and 5-fluorouracil are currently used as antitumor drugs that inhibit the DNA synthesis of tumor cells. Recently, researchers discovered interesting compounds such as ferrocene (Wu et al., 2010), doxorubicin (Herringson and Altin, 2010), eribulins (Taur et al., 2010) and xanthones, which show interesting cytotoxic activity in destroying tumor cells.

Bioactivities of Xanthones

Mixed Shikimate Acetate Pathway

The oxygenation patterns of all xanthones in higher plants are thought to be formed by a pathway known as the mixed shikimate acetate pathway.

Figure 2.2: Biosynthesis of xanthone through mixed shikimate acetate        pathway
Figure 2.2: Biosynthesis of xanthone through mixed shikimate acetate pathway

Chemical Synthesis of Xanthones

Grover, Shah and Shah Classic Method

The advantage of this modified synthesis method is that the required reaction temperature is very low. In addition, there is no direct promotion of cyclization in this method, although the formation of the benzophenone intermediate must occur in the mechanism.

Figure 2.3: Synthesis of xanthone (Grover, Shah and Shah, 1955)
Figure 2.3: Synthesis of xanthone (Grover, Shah and Shah, 1955)

Ullmann Method

Xanthone carboxylic acid was obtained by oxidation of the methyl group on phenol with potassium permanganate in alkaline solution (i). However, the procedures are very tedious and involve several factors that are difficult to regulate.

Figure 2.4: Synthesis of xanthone (Ullmann and Pauchaud, 1906)
Figure 2.4: Synthesis of xanthone (Ullmann and Pauchaud, 1906)

Chemical Synthesis of Prenylated Xanthones

O-prenylated and C-prenylated Xanthones

Later, an alternative approach for the synthesis of prenylated xanthones was developed to solve this problem. In 2009, Castanheiro and co-researchers found that, using MAOS, the yield of oxyprenylated xanthone (in Figure 2.6), 1-hydroxy-2-methyl-3-(3-methyl-but-2-enyloxy)-xanthen-9-ene, increased dramatically from 48% to 83%.

Figure 2.7: Cyclization of 1-hydroxy-2-methyl-3-(3-methyl-but-2-enloxy)-  xanthen-9-one
Figure 2.7: Cyclization of 1-hydroxy-2-methyl-3-(3-methyl-but-2-enloxy)- xanthen-9-one

Cytotoxic Activities of Xanthones

Pyranoxanthones

In fact, when two epoxy groups were attached at the 3, 5 position of xanthone, the cytotoxic activity increased dramatically (Liou et al., 1993). In addition, Woo et al also reported that a double epoxy group substitution in the xanthone building block generated better cytotoxic activity than a single epoxy substitution.

Figure 2.9: Synthesis of pyranoxanthones (Ho et al., 2001)
Figure 2.9: Synthesis of pyranoxanthones (Ho et al., 2001)

Furanoxanthones

Psorespermin, a dihydrofuranoxanthone, was shown to exhibit a significant level of antitumor activity in the cell culture derived from a human carcinoma of the nasopharynx (K.B) in vitro system and also on the mouse leukemia P338 in vivo system (Kupchan et al., 1980).

Materials

  • Chemical Reagents
  • Chemical Synthesis of 1,6-Dihydroxyxanthone
  • Prenylation of 1,6-Dihydroxyxanthone in Organic Medium
  • Prenylation of 1,6-Dihydroxyxanthone in Aqueous Medium
    • Preparation of 10% Hydrochloric Acid
  • Purification by Using Chromatographic Methods
  • Thin Layer Chromatography (TLC)

The top layer which is organic layer was separated and dried using a rotary evaporator. 16 mmol (2.3864 g) of prenyl bromide was prepared in a 5 ml graduated cylinder and was added dropwise to the reaction mixture using Pasteur pipette. The reaction mixture was cooled to room temperature and the precipitate was filtered using a filter funnel.

Both the products and the filtrate were combined and subjected to column chromatography with gradient elution using 100% hexane. Using a syringe, the mixture of acetone and prenyl bromide was slowly added to the xanthone mixture. The measuring cylinder was rinsed with 1 ml of acetone and poured into the reaction mixture.

Then 100 ml of 10% hydrochloric acid, HCl was added dropwise with a Pasteur pipette while stirring at room temperature until the mixture became acidic.

Table 3.2: List of chemical reagents for prenylation of xanthone block
Table 3.2: List of chemical reagents for prenylation of xanthone block

Instruments

  • Nuclear Magnetic Resonance (NMR)
  • Infrared (IR) Spectroscopy
  • Ultraviolet-Visible (UV-Vis) Spectroscopy
  • Melting Point Apparatus

In this study, Perkin Elmer 2000-FTIR spectrophotometer was used for sample analysis in the absorption range of 4000 cm-1 to 400 cm-1. A small amount of sample was dissolved in ethanol and measured using a quartz cuvette in the range of 100 nm to 800 nm. The melting point of a compound is the temperature at which the material changes from the solid state to the liquid state.

Pure crystalline matter has a clear and sharply defined melting point because it melts at a precisely defined temperature. The measurement of melting point is a simple yet important test to determine the purity of organic compound. Barnstead Electrothermal 9100 melting point apparatus was used to determine the melting point of the samples.

Before the melting point measurement system was put into operation, its temperature scale was calibrated using suitable reference substances with an accurately known melting point.

Calculation

Percentage Yield of Xanthones

Optical density values ​​of the cells were measured using Model 550 microplate reader (Bio-Rad Laboratories, Hercules, CA, USA) at wavelength 550 nm. Where x = average optical density value of cell treated with compound y = average optical density value of blank medium.

Percentage Yield of Xanthone Block and Its Derivatives

Synthesis and Isolation of Xanthone Block

Structure Elucidation of 1,6-Dihydroxyxanthone

In this synthesis, 1,6-dihydroxyxanthone was isolated as the major compound and it occurs as yellowish solids with a melting point range of 247oC to 249oC. From the 1H-NMR spectrum (Figure 4.2) of 1,6-dihydroxyxanthone, the peaks located in the chemical shift (δ) from 6.0 ppm to 8.0 ppm indicated the presence of aromatic protons. The 13C-NMR spectrum (Figure 4.3) of 1,6-dihydroxyxanthone revealed a resonance at 181.2 ppm, which was assigned to the highly shielded carbonyl carbon at carbon position C-9.

The 13 C-NMR spectrum were characteristic signals for the aromatic carbon atoms attached to the electronegative oxygen atom, corresponding to carbon C-1, C-6, C-10a and C-4a, respectively. 13 C-NMR spectral data were consistent with the proposed structure 1,6-dihydroxyxanthone with a molecular formula of C13H8O4. From the IR spectrum (Figure 4.4), the broad absorbance at 3476 cm-1 indicated the presence of an -OH functional group, while the peak at 1607 cm-1 indicated the presence of a C=O functional group.

These two characteristic bands in IR spectrum were consistent with the functional groups present in the compound and this further confirmed that the compound was 1,6-dihydroxyxanthone.

Table 4.2: Summary of physical properties of 1,6-dihydroxyxanthone
Table 4.2: Summary of physical properties of 1,6-dihydroxyxanthone

Proposed Mechanism for Synthesis of 1,6-Dihydroxyxanthone

Prenylation of 1,6-Dihydroxyxanthone in Organic Medium

From the 13 C-NMR spectrum (Figure 4.10), a signal of 181.3 ppm was assigned to the highly shielded carbonyl carbon C-9. The assignment of resonance in the 1 H-NMR and 13 C-NMR spectra of this compound was further confirmed by a 2D-NMR analysis. The verification of the structure of the proposed compound was accomplished through the combination of HMQC and HMBC spectral data.

Quaternary carbon atoms gave no correlation in the HMQC spectrum, but the assignment of their carbon positions in the structure can be achieved through the long-range coupling. The combination of 1 H-NMR, 13 C-NMR and 2D-NMR spectra has suggested the structure of the compound as 1-hydroxy-6-(3-methyl-but-2-enyloxy)-xanthen-9-one with the molecular formula C18H16O4. The IR spectrum (Figure 4.13) shows that a broad band at 3402 cm-1 is due to the presence of –OH functional groups in the compound.

Together, these data were found to be in correspondence with the structure characteristic of the proposed 1-hydroxy-6-(3-methyl-but-2-enyloxy)-xanthen-9-one.

Table 4.4: Summary of physical properties of 1-hydroxy-6-(3-methyl-but-2-     enyloxy)-xanthen-9-one
Table 4.4: Summary of physical properties of 1-hydroxy-6-(3-methyl-but-2- enyloxy)-xanthen-9-one

Prenylation of 1,6-Dihydroxyxanthone in Aqueous Medium

This compound was synthesized through the reaction between 1,6-dihydroxyxanthone and prenyl bromide in the presence of potassium carbonate in aqueous medium. Besides 1-(3-methyl-but-2-enyloxy)-6-(3-methyl-but-2-enyloxy)-xanthene-9-, another major compound isolated from this synthesis was 1-hydroxy-6- (3-methyl-but-2-enyloxy)-xanthen-9-one which was identical to the compound produced in the previous prenylation of 1,6-dihydroxyxanthone in organic acetone medium. 1H-NMR analyzes (Figure 4.17) of 1-(3-methyl-but-2-enyloxy)-6-(3-methyl-but-2-enyloxy)-xanthen-9-one revealed that two prenyl groups were replaced by the composition.

The intense peak at 1618 cm-1 was an indication of the presence of C=O functional group in the compound. The xanthone block, 1,6-dihydroxyxanthone and its derivatives, 1-hydroxy-6-(3-methyl-but-2-enyloxy)-xanthene-9-one and 1-(3-methyl-but-2-enyloxy) - 6-(3-methyl-but-2-enyloxy)-xanthen-9-ones were synthesized and tested for their cytotoxic activities against HeLa and MDA-MB-231 cancer cell lines. Meanwhile, both the derivatives of xanthone, 1-hydroxy-6-(3-methyl-but-2-enyloxy)-xanthen-9-one and 1-(3-methyl-but-2-enyloxy)-6-(3 ) -methyl-but-2-enyloxy)-xanthen-9-one did not give any significant inhibitory activity against HeLa cancer cell line.

This result indicated that the cytotoxic activity depends on the presence of the hydroxyl group in the xanthone.

Figure 4.16: Equation of reaction for prenylation in aqueous medium
Figure 4.16: Equation of reaction for prenylation in aqueous medium

1,6-dihydroxyxanthone

Conclusions

In this study, a total of three pure compounds, namely 1,6-dihydroxyxanthone, 1-hydroxy-6-(3-methyl-but-2-enyloxy)-xanthen-9-one, and 1 -(3-methyl-but-2-enyloxy)-6-(3-methyl-but-2-enyloxy)-xanthen-9-one. The structures of these pure compounds were determined by 1H-NMR, 13C-NMR and mass spectrometry analyses. Elucidation of the structure of 1-hydroxy-6-(3-methyl-but-2-enyloxy)-xanthen-9-one and 1-(3-methyl-but-2-enyloxy)-6-(3-methyl-but-2 -enyloxy)-xanthen-9-one was further confirmed using 2D-NMR spectroscopy, including HMQC and HMBC analyses.

The bioassay test was performed for the xanthone block and its derivatives towards HeLa and MDA-MB-231 cancer cell lines. The xanthone block, 1,6-dihydroxyxanthone, was found to have moderate inhibitory activity against the HeLa cancer cell line with an IC50 value of 7.0 μg/ml, but. Meanwhile, 1-hydroxy-6-(3-methyl-but-2-enyloxy)-xanthen-9-one and 1-(3-methyl-but-2-enyloxy)-6-(3-methyl-but-2 -enyloxy)-xanthen-9-one was found to have negligible inhibitory activity against MDA-MB-231 and HeLa cancer cell line with IC50 value more than 50 μg/ml.

Recommendations for Further Studies

Xanthones as growth inhibitors of human cancer cell lines and their effect on the proliferation of human lymphocytes in vitro. The following tables summarize the triplicate absorbance assay results for 1,6-dihydroxyxanthone against the HeLa cancer cell line. The following tables summarize the triplicate absorbance assay results for 1-hydroxy-6-(3-methyl-but-2-enyloxy)-xanthen-9-one against the HeLa cancer cell line.

The following tables summarize the triplicate absorbance assay results for 1-(3-methyl-but-2-enyloxy)-6-(3-methyl-but-2-enyloxy)-xanthen-9-one against the HeLa cancer cell line. The following tables summarize the triplicate absorbance assay results for 1,6-dihydroxyxanthone against the MDA-MB-231 cancer cell line. The following tables summarize the triplicate absorbance assay results for 1-hydroxy-6-(3-methyl-but-2-enyloxy)-xanthen-9-one against the MDA-MB-231 cancer cell line.

The following tables summarize the triplicate results of the absorption analysis for 1-(3-methyl-but-2-enyloxy)-6-(3-methyl-but-2-enyloxy)-xanthen-9-one against MDA -MB-231 cancer cell line.

Gambar

Figure 2.1: Biosynthesis of xanthone through acetate polymalonic route
Figure 2.2: Biosynthesis of xanthone through mixed shikimate acetate        pathway
Figure 2.3: Synthesis of xanthone (Grover, Shah and Shah, 1955)
Figure 2.4: Synthesis of xanthone (Ullmann and Pauchaud, 1906)
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