Research Paper
An evaluation of the genus Amphidinium (Dinophyceae) combining evidence from morphology, phylogenetics, and toxin production, with the introduction of six novel species
Sarah Karafas
a,*, Sing Tung Teng
b, Chui Pin Leaw
c, Catharina Alves-de-Souza
daAlgalResourcesCollection,UniversityofNorthCarolinaWilmington,MarineBiotechnologyFacility,5600MarvinK.MossLn.,Wilmington,NC28403,USA
bFacultyofResourceScienceandTechnology,UniversitiMalaysiaSarawak,94300KotaSamarahan,Sarawak,Malaysia
cBachokMarineResearchStation,InstituteofOceanandEarthSciences,UniversityofMalaya,Bachok,16310Kelantan,Malaysia
dAlgalResourcesCollection,UniversityofNorthCarolinaWilmington,MarineBiotechnologyFacility,5600MarvinK.MossLn.,Wilmington,NC28403,USA
ARTICLE INFO
Articlehistory:
Received4May2017
Receivedinrevisedform1August2017 Accepted1August2017
Availableonline29August2017
ThismanuscriptisdedicatedtoDr.Theo- doreJ.Smayda(1932–2017)inhonorofhis lifetime dedication to phytoplankton ecologyandserviceasformereditorof HarmfulAlgae.
Keywords:
Secondarystructure Compensatorybasechange Cytotoxicity
Scales 28S ITS
ABSTRACT
ThegenusAmphidiniumisanimportantgroupofathecateddinoflagellatesbecauseofitshighabundance inmarinehabitats,itsmember’sabilitytoliveinavarietyofenvironmentalconditionsandabilityto producetoxins.Furthermore,thegenusisofparticularinterestinthebiotechnologyfieldforitspotential inthepharmaceuticalarena.Taxonomicallythethereisahistoryofcomplicationandconfusionoverthe properidentitiesandplacementsofAmphidiniumspeciesduetohighgeneticvariabilitycoupledwith highmorphologicalconservation.Thirteenyearshaspassedsincethemostrecentreviewofthegroup, andwhilemanyissueswereresolved,someremain.Thepresentstudyusedmicroscopy,phylogeneticsof the28SregionofrDNA,secondarystructureoftheITS2regionofrDNA,compensatorybasechangedata, andcytotoxicitydatafromAmphidiniumstrainscollectedworld-widetoelucidateremainingconfusion.
Thisholisticapproachusingmultiplelinesofevidenceresultedinamorecomprehensiveunderstanding ofthemorphological,ecological,andgeneticcharacteristicsthatareattributedtoorganismsbelongingto Amphidinium,includingsixnovelspecies:A.fijiensis,A.magnum,A.paucianulatum,A.pseudomassartii,A.
theodori,andA.tomasii.
©2017ElsevierB.V.Allrightsreserved.
1.Introduction
ThegenusAmphidiniumisagroupofathecateddinoflagellates thatareincrediblydiverseinthat,whilebeinghighlyconserved morphologically, they thrive world-wide in a wide variety of habitats(Dodge, 1982;DolapsakisandEconomou-Amilli,2009;Flø Jørgensenetal.,2004a,2004b;Larsen,1985;LarsenandPatterson, 1990), temperatures(Murray and Patterson,2002), and trophic modes(FløJørgensenetal.,2004;Murrayetal.,2004;Murrayand Patterson, 2002).They also producetoxins and bioactivecom- poundsthatcanhavebothharmfuleffects.Reportsindicatethat Amphidinium blooms cause fish kills and that the toxins they producemayincreasetheeffects ofCiguateraFishPoisoningas theyareoftenfoundinassociationwithGamberdiscusinaffected
areas(Baigetal.,2006;Rhodesetal.,2010;TindallandMorton, 1998).Theyalsohavebeneficialeffects,producingcompoundsthat exibitantifungalorantimicrobialproperties(Echigoyaetal.,2005;
Kobayashi andKubota,2007; Kobayashiet al.,1991; Kobayashi, 2008;Mengetal.,2010;Nuzzoet al.,2014;Satakeetal.,1991;
Washida,2006).Theygroweasilyinculture,andcanbescaledup tomassculturingvolumesappropriateforchemicalanalyses.
Presentlythegenusincludesbothheterotrophicandautotro- phicformspossessingacharacteristicallyminuteepiconethatis deflectedtowardstheleft.TheautotrophicAmphidiniumconsistof twoclades(FløJørgensenetal.,2004a,2004b)thataresistertoone another.ThefirstwillbereferredtoastheHerdmaniiCladeand includes:A.steiniiLemmerman,A.mootonorumMurrayandD.J.
Patterson,A.herdmaniiKofoidandSwezy,andA.cupulatisquamaM.
TamuraandT.Horiguchi.ThesecondistheOperculatumCladeand includes:A.carteraeHulburt,A.massartiiBiecheler,A.gibbossum(L.
Maranda and Y. Shimizu) Flø Jørgensen and Murray, A. trulla Shauna Murray, Rhodes, and Flø Jørgensen, A. operculatum Claparède & Lachmann, and, most recently, A. thermaeum
*correspondingauthor.
E-mailaddresses:[email protected](S.Karafas),[email protected] (S.T.Teng),[email protected](C.P.Leaw),[email protected]
(C.Alves-de-Souza).
http://dx.doi.org/10.1016/j.hal.2017.08.001 1568-9883/©2017ElsevierB.V.Allrightsreserved.
HarmfulAlgae68(2017)128–151
ContentslistsavailableatScienceDirect
Harmful Algae
j o u r n a l h o m ep a g e: w w w . e l s e v i e r . c o m / l o c a te / h a l