• Tidak ada hasil yang ditemukan

DAFTAR PUSTAKA. Saran

N/A
N/A
Protected

Academic year: 2021

Membagikan "DAFTAR PUSTAKA. Saran"

Copied!
5
0
0

Teks penuh

(1)

Isolat-isolat lokal terdiri atas 16 biotipe berdasarkan sifat biokimianya. Parameter yang digunakan dalam proses biotyping ini adalah 10 dari 19 uji biokimia pada RapID onE.

Dari 17 isolat yang diamplifikasi gen infBnya, maka ditemukan 14 isolat memiliki gen tersebut. Tiga isolat yang tidak memiliki gen infB, dimana ketiga isolat tersebut teridentifikasi sebagai C. turicensis berdasarkan 4 reaksi biokimia Iversen.

Dari 6 isolat lokal Cronobacter spp. yang dianalisa keragaman Gen infBnya, maka isolat lokal dibedakan atas dua kelompok. Isolat DES b7a, DES b10, DES c13, YR t2a dan E6 memiliki kekerabatan yang dekat dengan isolat C. sakazakii ATCC BAA-894 dan C. sakazakii ES15. Isolat YR c3a memiliki

hubungan kekerabatan yang dekat dengan isolat C. malonaticus 681 WGS dan C. dublinensis 582 WGS. Gen infB dapat digunakan untuk mengkonfirmasi hasil

identifikasi berdasarkan gen 16S rRNA yakni dengan mampu memisahkan spesies C. sakazakii dan C. malonaticus.

Saran

Perlu dilakukannya penelitian lanjutan untuk validasi parameter uji biokimia Iversen ditambah uji pyrohydonyl-β-naphthylamide dan 10 uji biokimia RapID onE dalam melakukan biotyping isolat Cronobacter spp. Sedangkan uji karakterisasi genetik berdasarkan gen infB masih perlu dikembangkan dengan menggunakan primer berbeda sehingga dapat diperoleh peran gen ini secara lengkap.

DAFTAR

PUSTAKA

Adams MR and Moss MS. 2000. Food Microbiology. RSC, Cambridge.

Adria Developpement. 2012. EN ISO 16140 validation study of the RAPID sakazakii method for the detection of Cronobacter spp. in infant formula. Bio-Rad [Internet]. [Diunduh 25 Mei 2013]. Tersedia pada http://www.afnor -validation.org/rapports-synthese/BIO-RAD/Synt-BRD-07-22-05-2_(en).pdf Al-Holy MA, Lin M, M.M. Abu-Ghoush MM, Al-Qadiri HM, Rasco BA. 2009.

Thermal resistance, survival and inactivation of Enterobacter sakazakii (Cronobacter spp.) in powderes and reconstited infant formula. Journal of Food Safety. 29: 287–301.

Asakura H, Morita-Ishihara T, Yamamoto S, Igimi S. 2007. Genetic characterization of thermal tolerance in Enterobacter sakazakii. Microbiology Immunology. 51(7): 671-677.

Autoun A, Paylov MY, Andersson K, Tenson T, Ehrenberg M. 2003. The roles of initiation factor 2 and guanosine triphosphate in initiation of protein synthesis. The EMBO Journal 22 (20) : 5593-5601.

Baldwin A, Loughlin M, Caubilla-Barron J, Kucerova E, Manning G, Downson C, Forsythe S. 2009. Multilocus sequence typing of Cronobacter sakazakii and Cronobacter malonaticus reveals stable clonal structures with clinical

(2)

significance which do not correlate with biotypes. BMC Microbiology. 9: 223. doi: 10.1186/1471-2180-9-223.

Black JG. 2012. Microbiology: Principles and Explorations, 8th ed. John Wiley & Sons, Inc., United States. p 232-263.

Brady C, Cleenwerck I, Venter S, Countinho T, De Vos P. 2013. Taxonomic evaluation of the genus Enterobacter based on multilocus sequenceanalysis (MLSA): Proposal to reclassify E. nimipressuralis and E. amnigenus into Lelliottia gen. nov. as Lelliottia nimipressuralis comb. nov. and Lelliottia amnigenacomb. nov., respectively, E. gergoviae and E. pyrinus into Pluralibacter gen. nov. as Pluralibacter gergoviae comb. nov. and Pluralibacter pyrinus comb. nov.,respectively, E. cowanii, E. radicincitans, E. oryzae and E. arachidis into Kosakoniagen. nov. as Kosakonia cowanii comb. nov., Kosakonia radicincitans comb. nov., Kosakonia oryzae comb. nov. and Kosakonia arachidis comb. nov., respectively, and E. turicensis, E. helveticus and E. pulveris into Cronobacter as Cronobacter zurichensis nom. nov., Cronobacter helveticus comb. nov. and Cronobacter pulveris comb. nov., respectively, and emended description of the genera Enterobacter and Cronobacter. Systematic and Applied Microbiology. http://dx.doi.org/10.1016/j.syapm.2013.03.005.

Breeuwer P, Lardeau A, Peterz M, Joosten HM. 2003. Desiccation and heat tolerance of Enterobacter sakazakii. Journal of Applied Microbiology. 95: 967–973. doi: 10.1046/j.1365-2672.2003.02067.x.

Brown TA. 1992. Genetics : Molecular Approach, Second Edition. Chapman & Hall, London.

Chagla AH, Borczyk AA, Aldom JE, Rosa SD, Cole DD. 1993. Evaluation of the L-pyrrolidonyl-p-naphthylamide hydrolysis test for the differentiation of members of the families Enterobacteriaceae and Vibrionaceae. Journal of Clinical Microbiology. 31(7): 1946-1948.

De Barros M, Celligoi MAPC. 2006. Synthesis of sorbitol by Zymomonas mobilis under high osmotic pressure. Brazilian Journal of Microbiology. 37: 324-328.

Dewanti-Hariyadi R, Gitapratiwi G, Meutia YR, Estuningsih S, Hidayat SH, Nurjanah S. 2010. Isolation of Enterobacter sakazakii (Cronobacter spp.) from powdered infant formula and other dry foods obtained from Bogor area, Indonesia. In Dewanti-Hariyadi R, Nuraida L, Gitapratiwi D, Immaningsih N, Hariyadi P (editors). Current Issues and Challenges in Food Safety: Science-based approach for food safety management; International Seminar December 2-3, 2009. Bogor (ID). Bogor: p281-286. Edelson-Mammel SG and Buchanan RL. 2004. Acid resistance of twelve strain of Enterobacter sakazakii [Abstrak]. Di dalam : Proceedings of the 91st Annual

Meeting of International Association of Food Protection ; United States of America, 8-11 Agustus 2004. Abstr no P170.

El-Sharoud WM, O’Brien S, Negredo C, Iversen C, Fanning S, Healy B. 2009. Characterization of Cronobacter recoveres from dried milk and related products. BMC Microbiology. 9: 24. doi: 10.1186/1471-2180-9-24.

Estuningsih S, Holtkötter C, Hassan A, Schneider ÖAE, Usleber E. 2006. Enterobacteriaceae in dehydrated powdered infant formula manufactured in Indonesia and Malaysia. Journal of Food Protection. 69(12): 3013-3017.

(3)

Farmer JJ, Asbury MA, Hickman FW, Brenner DJ, and Enterobactericeae study group. 1980. Enterobacter sakazakii : a new spesies of “Enterobacteriaceae” isolated from clinical spesimens. International Journal of Systematic Bacteriology. 30(3): 569-584.

[FDA] U.S. Food and Drug Administration. 2002a. Infant formula FDA issues health alert for powder infant formula. FDA [Internet]. [diunduh 16 Maret 2013]. Tersedia pada http://www.fda.gov/ICECI/EnforcementActions/ EnforcementStory/EnforcementStoryArchive/ucm105959.htm.

[FDA] U.S. Food and Drug Administration. 2002b. Isolation and enumeration of Enterobacter sakazakii from dehydrated powdered infant formula. FDA [Internet]. [diunduh 25 Mei 2013]. Tersedia pada http://www.fda.gov/ Food/FoodScienceResearch/LaboratoryMethods/ucm114665.htm

Fiore A, Casale M, Aureli P. 2008. Enterobacter sakazakii: epidemiology, clinical presentation, prevention and control. Ann Ist Super Sanità. 44(3): 275-280. Ghassem M, Babji AS, Forsythe SJ, Norrakiah AS. 2011. Growth and survival of

Cronobacter species as measured by media Performance. International Food Research Journal. 18: 367-372.

Gitapratiwi D. 2011. Isolasi dan Keragaman Genetika Enterobacter sakazakii (Cronobacter spp.) dari Perangkat terkait persiapan susu formula, susu formula dan makanan kering lainnya [tesis]. Bogor (ID): Institut Pertanian Bogor.

Gitapratiwi D, Dewanti-Hariyadi R, Hidayat SH. 2012. Genetic relatedness of Cronobacter spp. (Enterobacter sakazakii) isolated from dried food products in Indonesia. International Food Research Journal. 19(4): 1745-1749.

Haa SJ, Galazkac JM, Kim SR, Choi JH, Yangd X, Seo JH, Glass NL, Catec JHD, Jina YS. 2011. Engineered Saccharomyces cerevisiae capable of simultaneous cellobiose and xylose fermentation. PNAS 108 (2) : 504–509. Hamdani FW. 2012. Evaluasi keragaman genetika isolate lokal Cronobacter spp. (Enterobacter sakazakii) yang diperoleh dari produk pangan kering [tesis]. Bogor : Program Pascasarjana, Institut Pertanian Bogor.

Hedegaard J, Steffensen SAA, Narskov-Lauritsen N, Mortensen KK, Sperling-Petersen HU. 1999. Identification of Entrobacteriaceae by partial sequencing of the gene encoding translation initiation factor 2. International Journal of Systematic Bacteriology 49 : 1531-1538.

Holt JG. 2000. Bergey’s manual of Determinative Bacteriology. Ninth edition. Lippincott William & Wilkins, USA.

Iversen C and Forsythe S. 2003. Risk profile of Enterobacter sakazakii, an emergent pathogen associated with infant milk formula. Tren in Food Science & Technology. 14: 443-454. doi: 10.1016/S0924-2244(03)00155-9. Iversen C, Lehner A, Mullane N, Marugg J, Fanning S, Stephan R, Joosten H.

2007a. Identification of “Cronobacter” spp. (Enterobacter sakazakii). Journal of Clinical Microbiology 45 (11): 3814-3816. doi: 10.1128/JCM.01026-07.

Iversen, C. Lehner A, Mullane N, Bidlas E, Cleenwerck I, Marugg J, Fanning S, Stephan R, Joosten H. 2007b. The toxonomy of Enterobacter sakazakii : proposal of a new genus Cronobacter gen. nov. and descriptions of Cronobacter sakazakii comb. nov. Cronobacter sakazakii subsp. sakazakii,

(4)

comb. nov., Cronobacter sakazakii subsp. malonaticus subsp. nov., Cronobacter turicensis sp. nov., Cronobacter muytjensii sp. nov., Cronobacter dublinensis sp. nov. and Cronobacter genomospecies I. BMC Evolutionary Biology 7 (64): 1-11. doi: 10.1186/1471-2148-7-64.

Iversen C, Lane M, Forsythe SJ. 2004a. The growth profile, thermotolerance and biofilm formation of Enterobacter sakazakii grown in infant formula milk. Letters in Applied Microbiology. 38: 378–382.

Iversen C, Mullane N, McCardell B, Tall BD, Lehner A, Fanning S, Stephan R, Joosten H. 2008. Cronobacter gen. nov., a new genus to accommodate the biogroups of Enterobacter sakazakii, and proposal of Cronobacter sakazakii gen. nov., comb. Nov., Cronobacter malonaticus sp. nov., Cronobacter turicensis sp. nov., Cronobacter muytjensii sp. nov., Cronobacter dublinensis sp. nov., Cronobacter genomospecies 1, and of three subspecies, Cronobacter dublinensis subsp. dublinensis subsp. nov., Cronobacter dublinensis subsp. lausannensis subsp. nov. and Cronobacter dublinensis subsp. lactaridi subsp. nov. International Journal of Systematic and Evolutionary Microbiology. 58: 1442-1447. doi: 10.1099/ijs.0.65577-0.

Iversen C, Waddington M, On SLW, Forsythe S. 2004b. Identification and phylogeny of Enterobacter sakazakii relative to Enterobacter and Citrobacter species. Journal of Clinical Microbiology 42 (11) : 5368-5370. Iversen C, Waddington M, Farmer JJ, Forsythe SJ. 2006. The biochemical differentiation of Enterobacter sakazakii genotypes. BMC Microbiology 6 : 94.

Jaradat ZE, Ababneh QO, Saadoun IM, Samara NA, Rashdan AM. 2009. Isolation of Cronobacter spp. (formerly Enterobacter sakazakii) from infant food, herbs and environmental samples and the subsequent identification and confirmation of the isolates using biochemical, chromogenic assay, PCR and 16S rRNA sequencing. BMC Microbiol. 9: 225.doi: 10.1186/1471-2180-9-225.

Kandhai MC. 2010. Detection, occurrence, growth and inactivation of Cronobacter spp. (Enterobacter sakazakii) [tesis]. Wageningen, Wageningen University.

Kim JB, Cho SH, Park YB, Lee JB, Kim JC, Lee BK, Lee HK, Chae HS. 2008. Surveillance of stool samples for the presence of Enterobacter sakazakii among Korean people. Yonsei Med Journal 49(6) : 1017-1022.

Laursen BS, Sorensen HP, Mortensen KK, Sperling-Petersen HU. 2005. Initiation of protein synthesis in bacteria. Microbiol. Mol. Biol. Rev. 69 (1) : 101. Madison KE, Abdelmeguid MR, Jones-Foster EN, Nakai H. 2012. A new role for

translation initition factor 2 in maintaining genome integrity. Plos Genetics 8 (4) : e1002648.

Mutia YR. 2008. Enterobacter sakazakii isolat susu formula dan makanan bayi : karakterisasi gen 16S rRNA dan perilaku bakteri pasca rekonstitusi [tesis]. Bogor : Program Pascasarjana, Institut Pertanian Bogor.

Muytjens HL, Zanen HC, Sonderkamp HJ, Kolle LA, Wachsmuth K, Farmer JJ. 1983. Analysis of eight cases of neonatal meningitis and sepsis due to Enterobacter sakazakii. Journal of Clinical Microbiology 18 (1) : 115-120.

(5)

Nazarowec-White M and Farber JM. 1997. Incidence, survival and growth of Enterobacter sakazakii in infant formula. Journal of Food Protection 60 (3): 226-230.

Nazarowec-White M, Farber JM. 1997b. Thermal resistance of Enterobacter sakazakii in reconstituted dried infant formula. Letters in Applied Microbiology 24: 9-13.

Nazarowec-White M and Farber JM. 1999. Phenotypic and genotypic typing of food and clinical isolates of Enterobacter sakazakii. J. Med. Microbiol. 48 : 559-567.

Oonaka K, Furuhata K, Hara M, Fukuyama M. 2010. Powder infant formula milk contaminated with Enterobacter sakazakii. Jpn. J. Infect. Dis. 63 : 103-107. Seftiono H. 2012. Kinetika inaktivasi Cronobacte spp. (Enterobacter sakazakii)

dalam susu formula dan system buffer dengan berbagai aw dan pH pada

proses pemanasan [tesis]. Bogor : Program Pascasarjana, Institut Pertanian Bogor.

Shaker R, Osaili T, Al-Omary W, Jaradat Z, Al-Zuby M. 2007. Isolation of Enterobacter sakazakii and other Enterobacter sp. from food and food production environments. Food Control 18 : 1241-1245.

Shazand K, Tucker J, Chiang R, Stansmore K, Sperling-Petersen HU, Grunberg-Manago M, Rabinowits JC, Leighton T. 1990. Isolation and molecular characterization of the Bacillus subtilis gene (infB) encoding protein synthesis initiation genetic factor 2. Journal of Bacteriology 172 (5) : 2675-2687.

Shazand K, Tucker J, Manago-Grunberg M, Rabinowitz JC, Leighton T. 1993. Similar organization of the nusA-infB operon in Bacillus subtilis and Escherichia coli. Journal of Bacteriology 175 (10) : 2880-2887.

Shin HD, Lee JU, Choi YH, Ryu S. 2012. Complete genome sequence of the opportunistic food-borne pathogen Cronobacter sakazakii ES15. Journal of Bacteriology 194 (16) : 4438-4439.

Stephan R, Trappen SV, Cleenwerck I, Iversen C, Joosten H, Vos PD, Lehner A. 2008. Enterobacter pulveris sp. nov., isolated from fruit powder, infant formula and an infant formula production environment. International Journal of Systematic and Evolutionary Microbiology 58 : 237–241. Van Acker J, De Smet F, Muyldermans GT, Bougatef A, Naessens A, Lauwers S.

2001. Outbreak of necrotizing enterocolitis associated with Enterobacter sakazakii in powdered milk formula. Journal of Clinical Microbiology 39 (1) : 292-297.

Viljoen G, Nel LH, Crowther JR. 2005. Molecular Diagnostic PCR Handbook. Springer, Netherlands.

Yamanaka K. 1999. Cold shock response in Escherichia coli. J. Mol. Microbiol. Biotechnol. 1(2) : 193-202.

Referensi

Dokumen terkait

[r]

Hal tersebut berarti Customer Satisfaction dalam penelitian ini mempunyai peranan yang penting dalam memediasi Dining Service Quality terhadap Revisit Intention

This research aims to know the process of teaching speaking by using Team Accelerated Instruction (TAI) and the response of the teacher and students of the Tenth Grade

“ PENGARUH SERVICE ENCOUNTER TERHADAP KEPUASAN TAMU DI HARRIS RESORT WATERFRONT BATAM” (Survey Pada Tamu Individu Mancanegara yang Menginap di HARRIS Resort

24 Menurut para pakar, kitab tafsir sufistik tertua yang sampai kepada kita adalah Tafsi> r al-Qur’a> n al-‘Az} i> m karya Sahl al- Tusta> ri (w. 25 Selain itu

Fitur-fitur yang terdapat pada Form Daftar Angsuran antara lain :. Tambah : digunakan apabila ingin menambah

[r]

Rumusan permasalahan dalam perancangan Fasilitas Pelatihan CADD di Makassar ini adalah merancang suatu fasilitas pelatihan yang mampu mengambarkan CADD itu seperti apa