Supplementary table 4. Variants details of the mutated genes.
SampleID CHROM POS REF ALT DP UMT VMT VMF Func Annotation Gene_Name Rank
#1 chr1 115258744 C T 82781 845 11 0.0130178 exonic missense_variant NRAS 2/7
#3 chr17 7577535 C G 62426 1402 124 0.0884451 exonic missense_variant TP53 7/11
#3 chr5 1295228 G A 29707 1526 110 0.0720839 upstream upstream_gene_variant TERT
#5 chr17 7578475 G A 82394 841 134 0.1593341 exonic missense_variant TP53 5/11
#5 chr17 7577098 T A 130295 936 147 0.1570513 exonic missense_variant TP53 8/11
#5 chr12 25398281 C T 66142 473 156 0.3298097 exonic missense_variant KRAS 2/6
#5 chr5 1295250 G A 31127 441 78 0.1768707 upstream upstream_gene_variant TERT
#8 chr17 7576891 T A 67565 852 242 0.2840376 exonic stop_gained TP53 9/11
#8 chr5 1295228 G A 35239 981 103 0.1049949 upstream upstream_gene_variant TERT
#9 chr17 7577547 C T 26730 6 4 0.6666667 exonic missense_variant TP53 7/11
#10 chr17 7576888 T A 60374 928 286 0.3081897 exonic stop_gained TP53 9/11
#11 chr17 7578275 G A 65856 270 87 0.3222222 exonic stop_gained TP53 6/11
#12 chr5 1295228 G A 34519 433 20 0.0461894 upstream upstream_gene_variant TERT
#17 chr5 1295228 G A 30278 497 20 0.0402414 upstream upstream_gene_variant TERT
#20 chr17 7578394 T A 46994 2252 640 0.2841918 exonic missense_variant TP53 5/11
#22 chr5 1295228 G A 33688 628 42 0.066879 upstream upstream_gene_variant TERT
#23 chr5 1295228 G A 33197 1337 93 0.0695587 upstream upstream_gene_variant TERT
#24 chr5 1295250 G A 34874 1187 68 0.0572873 upstream upstream_gene_variant TERT
#26 chr17 7579494 A T 80216 1585 951 0.6 exonic stop_gained TP53 4/11
#26 chr5 1295228 G A 17319 112 56 0.5 upstream upstream_gene_variant TERT
HGVS.c HGVS.p c.38G>A p.Gly13Asp c.746G>C p.Arg249Thr c.-124C>T
c.455C>T p.Pro152Leu c.840A>T p.Arg280Ser c.38G>A p.Gly13Asp c.-146C>T
c.955A>T p.Lys319*
c.-124C>T
c.734G>A p.Gly245Asp c.958A>T p.Lys320*
c.574C>T p.Gln192*
c.-124C>T c.-124C>T
c.536A>T p.His179Leu c.-124C>T
c.-124C>T c.-146C>T
c.193A>T p.Arg65*
c.-124C>T
