Laboratory Diagnosis, Prevention and Treatment
Laboratory Diagnosis, Prevention and Treatment
of Bacterial Infection
of Bacterial Infection
Xiao-Kui Guo
Manifestations of Infection:
Manifestations of Infection:
Signs and symptoms vary
Signs and symptoms vary
according to the site and severity of infection. Diagnosis
according to the site and severity of infection. Diagnosis
requires a composite of information, including
requires a composite of information, including
history,
history,
physical examination, radiographic findings, and
physical examination, radiographic findings, and
laboratory data
laboratory data
.
.
Microbial Causes of Infection:
Microbial Causes of Infection:
Infections may be
Infections may be
caused by bacteria, viruses, fungi, and parasites. The
caused by bacteria, viruses, fungi, and parasites. The
pathogen may be exogenous (acquired from
pathogen may be exogenous (acquired from
environmental or animal sources or from other persons)
environmental or animal sources or from other persons)
or endogenous (from the normal flora).
Specimen Selection, Collection, and
Specimen Selection, Collection, and
Processing
Processing
The quantity material must be adequate
The quantity material must be adequate
Specimens are selected on the basis of signs and sy
Specimens are selected on the basis of signs and sy
mptoms, should be representative of the disease pro
mptoms, should be representative of the disease pro
cess
cess
Contamination of the specimen must be avoided by
Contamination of the specimen must be avoided by
using only sterile equipment and aseptic precaution
using only sterile equipment and aseptic precaution
s
s
The specimen must be taken to the laboratory and
The specimen must be taken to the laboratory and
examined promptly. Special transport media may b
examined promptly. Special transport media may b
e helpful.
e helpful.
Meaningful specimens to diagnose bacterial infectio
Meaningful specimens to diagnose bacterial infectio
ns must be secured before antimicrobial drugs are
ns must be secured before antimicrobial drugs are
administered.
Microbiologic Examination
Microbiologic Examination
Culture:
Culture:Isolation of infectious agents frequently requires specialized media. NonselIsolation of infectious agents frequently requires specialized media. Nonsel ective (noninhibitory) media permit the growth of many microorganisms. Selective ective (noninhibitory) media permit the growth of many microorganisms. Selective media contain inhibitory substances that permit the isolation of specific types of mic media contain inhibitory substances that permit the isolation of specific types of mic roorganisms.
roorganisms.
Microbial Identification:
Microbial Identification: Colony and cellular morphology may permit preliminary Colony and cellular morphology may permit preliminary identification. Growth characteristics under various conditions, utilization of carboh identification. Growth characteristics under various conditions, utilization of carboh ydrates and other substrates, enzymatic activity, immunoassays, and genetic probes ydrates and other substrates, enzymatic activity, immunoassays, and genetic probes are also used.
are also used.
Antimicrobial Susceptibility:
Antimicrobial Susceptibility: Microorganisms, particularly bacteria, are tested in v Microorganisms, particularly bacteria, are tested in v itro to determine whether they are susceptible to antimicrobial agents.
itro to determine whether they are susceptible to antimicrobial agents.
Serodiagnosis:
Serodiagnosis:A high or rising titer of specific IgG antibodies or the presence of spA high or rising titer of specific IgG antibodies or the presence of sp ecific IgM antibodies may suggest or confirm a diagnosis.
ecific IgM antibodies may suggest or confirm a diagnosis.
Direct Examination and Techniques:
Artificial active immunity
Artificial active immunity
Toxoids:
Toxoids: a modified form of the toxin that preserves its antigenicity but has lost its a modified form of the toxin that preserves its antigenicity but has lost its toxicity. This has been spectacularly successful with tetanus and diphtheria.
toxicity. This has been spectacularly successful with tetanus and diphtheria.
Inactivated vaccines:
Inactivated vaccines: The production of protective antibodies is stimulated by usin The production of protective antibodies is stimulated by usin g the killed (inactivated) organisms This is done as a routine with vaccines against g the killed (inactivated) organisms This is done as a routine with vaccines against pertussis (whooping cough) , typhoid and influenza. There is also an inactivated pol pertussis (whooping cough) , typhoid and influenza. There is also an inactivated pol io vaccine.
io vaccine.
Attenuated live vaccines :
Attenuated live vaccines : The approach is to use suspensions of living organisms The approach is to use suspensions of living organisms that are reduced in their virulence (attenuated) but still immunogenic. This strategy that are reduced in their virulence (attenuated) but still immunogenic. This strategy has yielded: BCG
has yielded: BCG,, mumps, measles , and rubella vaccines (now combined); the live mumps, measles , and rubella vaccines (now combined); the live virus polio vaccine.
virus polio vaccine.
Special vaccines:
Special vaccines: polysaccharide vaccine, subunit vaccine, ( conjugate vaccine, bi polysaccharide vaccine, subunit vaccine, ( conjugate vaccine, bi o-engineered vaccine, chemical vaccine, synthetic vaccine ), nucleic acid vaccine, i o-engineered vaccine, chemical vaccine, synthetic vaccine ), nucleic acid vaccine, i diotype vaccine, autovaccine, etc.
diotype vaccine, autovaccine, etc.
Vaccines are antigens prepared from pathogens that can raise a
Vaccines are antigens prepared from pathogens that can raise a
protective immune response, yet do not cause illness. These
protective immune response, yet do not cause illness. These
prepared antigens will stimulate both B cells and T cells and help
prepared antigens will stimulate both B cells and T cells and help
to create memory cells that can later mount a vigorous immune
to create memory cells that can later mount a vigorous immune
response to an encounter with the real pathogen.
Artificial passive immunity
Artificial passive immunity
Antitoxin
Antitoxin
: e.g. Tetanus antitoxin and diphtheria antitox
: e.g. Tetanus antitoxin and diphtheria antitox
in. It is raised in the horse .It is most important to give
in. It is raised in the horse .It is most important to give
an intented recipient of equine serum a prior test dose t
an intented recipient of equine serum a prior test dose t
o exclude hypersensitivity subjects who may have been
o exclude hypersensitivity subjects who may have been
sensitized by a previous dose of equine serum.
sensitized by a previous dose of equine serum.
Pooled immunoglobulin
Pooled immunoglobulin
: It contains the normal repert
: It contains the normal repert
oire of antibodies for an adult, and can protect against h
oire of antibodies for an adult, and can protect against h
epatitis A, and measles.
epatitis A, and measles.
Specific immunoglobulin:
Specific immunoglobulin:
Preparations of specific im
Preparations of specific im
munoglobulin are available for passive immunization a
munoglobulin are available for passive immunization a
gainst tetanus, hepatitis B, rabies, varicella-zoster.
gainst tetanus, hepatitis B, rabies, varicella-zoster.
Cytokine
Active-passive immunity
Active-passive immunity
involves giving both a vaccine to provide
involves giving both a vaccine to provide
long-term protection (preventive infection)
long-term protection (preventive infection)
and immune globulin to provide immediate
and immune globulin to provide immediate
protection (therapeutic and preventive
protection (therapeutic and preventive
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DI = duration of illness, DH = duration of hospitalization, B/BF = blood/body fluid DI = duration of illness, DH = duration of hospitalization, B/BF = blood/body fluid precautions, D/S = drainage/secretion precautions, E = enteric precautions, C = precautions, D/S = drainage/secretion precautions, E = enteric precautions, C = contact isolation, S = strict isolation, R = respiratory isolation, TB = tuberculosis contact isolation, S = strict isolation, R = respiratory isolation, TB = tuberculosis isolation, U = universal precautions.
General procedure for collecting and processing
General procedure for collecting and processing
specimens for aerobic and/or anaerobic bacterial culture
Agglutination test in which inert particles (latex beads or heat-killed
Agglutination test in which inert particles (latex beads or heat-killed
S aureu
S aureu
s
s
Cowan 1 strain with protein A) are coated with antibody to any of a variety
Cowan 1 strain with protein A) are coated with antibody to any of a variety
of antigens and then used to detect the antigen in specimens or in isolated ba
of antigens and then used to detect the antigen in specimens or in isolated ba
cteria.