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Copyright

IIT Kharagpur

BIOCHEMICAL CHARACTERIZATION OF INDUCED DEFENSE IN TOMATO AGAINST Fusarium

oxysporum f. sp. lycopersici

Sudhamoy Mandal

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IIT Kharagpur

BIOCHEMICAL CHARACTERIZATION OF INDUCED DEFENSE IN TOMATO AGAINST Fusarium

oxysporum f. sp. lycopersici

Thesis submitted to the

Indian Institute of Technology Kharagpur For award of the degree

of

Doctor of Philosophy

by

Sudhamoy Mandal

AGRICULTURAL AND FOOD ENGINEERING DEPARTMENT INDIAN INSTITUTE OF TECHNOLOGY KHARAGPUR

KHARAGPUR – 721 302, INDIA

JUNE 2008

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IIT Kharagpur

ii

Curriculum Vitae

Sudhamoy Mandal [email protected]

Education

M. Sc. (Plant Pathology) 1996 from Indian Agricultural Research Institute (IARI), New Delhi. Website: www.iari.res.in

B.Sc. (Ag.) Honrs. 1993 from Bidhan Chandra Krishi Viswavidyalaya (BCKV), Mohanpur, Nadia, West Bengal. Website: www.bckv.edu.in Professional Experience

Employment

Plant Pathology Laboratory, Central Horticultural Experiment Station (ICAR), Aiginia, Bhubaneswar, PIN – 751019, INDIA.

Website: www.iihr.res.in Other

Bioinformatics in genomics and proteomics: Short term course at Indian Institute of Technology, Kharagpur (September 22 – 23, 2006)

Foundation course training at National Academy of Agricultural Research Management (NAARM), Hyderabad (June 1 – September 28, 1999).

Senior Research Fellowship of Indian Council of Agricultural Research (ICAR), New Delhi (1996-97 program).

Junior Research Fellowship of Indian Council of Agricultural Research (ICAR), New Delhi (1993-94 program).

Publications

Sudhamoy Mandal, Adinpunya Mitra (2008). Reinforcement of cell wall in roots of Lycopersicon esculentum through induction of phenolic compounds and lignin by elicitors. Physiological and Molecular Plant Pathology.

Doi:10.1016/j.pmpp.2008.02.003

Sudhamoy Mandal, Adinpunya Mitra (2008). Accumulation of cell wall- bound phenolic metabolites and their upliftment in hairy root cultures of tomato (Lycopersicon esculentum Mill.). Biotechnology Letters.

Doi:10.1007/s10529-008-9666-9

Sudhamoy Mandal, Adinpunya Mitra, Nirupama Mallick (2008).

Biochemical characterization of oxidative burst during interaction between Solanum lycopersicum and Fusarium oxysporum f. sp. lycopersici.

Physiological and Molecular Plant Pathology. (Accepted for publication) Sudhamoy Mandal, Nirupama Mallick, Adinpunya Mitra (2008). Salicylic acid induces resistance to Fusarium oxysporum f. sp. lycopersici, causal organism for Fusarium wilt of tomato. Journal of Plant Physiology.

(Revised submitted).

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IIT Kharagpur

CERTIFICATE

This is to certify that the thesis entitled, “Biochemical characterization of induced defense in tomato against Fusarium oxysporum f. sp. lycopersici”, submitted by Sudhamoy Mandal to the Indian Institute Technology Kharagpur for the partial fulfillment of award of the degree Doctor of Philosophy, is a record of bona fide research work carried out by him under our supervision and guidance.

The thesis in our opinion, is worthy of consideration for award of the degree of Doctor of Philosophy in accordance with the regulation of the Institute. To the best of our knowledge, the results embodied in this thesis have not been submitted to any other University or Institute for the award of any other Degree or Diploma.

_____________________________ ______________________________

Supervisor Supervisor

(Dr Adinpunya Mitra) (Dr Nirupama Mallick) Associate Professor Associate Professor

Date:

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iv

D D ed e di i ca c at te e d d to t o

My M y L L at a te e Mo M ot th he e r r

(w(whhooststiillllbbeessttoowwss heherrblbleessssiinnggssononmeme ffrroommheherr hheeaavveennllyyababooddeesisinnccee 2

233rrddAuAugguusstt,,20200011))

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Copyright

IIT Kharagpur

A Acknowledgements

I am grateful to my esteemed supervisors, Dr Adinpunya Mitra and Dr Nirupama Mallick. I thank Dr Mitra for giving me the opportunity to do my Ph D thesis in his group. His guidance, talented ideas and enduring encouragement over these years have been invaluable. I am indebted to Dr Mallick; without her valuable suggestions, inspiring critique and keen interest in my work finishing this thesis would have been an uphill task.

I am thankful to Dr S. Dutta Gupta, Dr T. K. Maiti and Dr S. K. Ghosh for providing critical ideas to enrich the content and enlarge the ambit of the thesis.

I express my sincere gratitude to Prof B. C. Mal for providing the necessary facilities during this study as Head of the Department.

I gratefully acknowledge Indian Council of Agricultural Research for granting me three years study leave to carry out my doctoral research.

My warmest thanks are due to all present and former members of Dr Mitra’s and Dr Mallick’s groups: Debu, Akhilesh, Sovan, Anurag, Moumita, Bhabatarini, Rishi (present members) and Anasuya, Laxuman, Ashish, Shashwati, Gargi, Dola (former members). I must reserve special thanks for Dipjyoti and Biswapriya for friendship and the good times we shared.

I thank my friends Priyabrata, Amit, Surajit, Uttam, Parag, Pinak, Soumen, Prasad, Kaushal, Sudipto, Dibyendu, to name a few, for their really good friendship.

I must give heartfelt thanks to Narayan, Lakshmikanta and Sasanka for their help provided to me over these years.

Lastly, but not the least, I wish to record my gratitude to my extended family – my late mother, my father, my wife, my son, my two brothers and their families, my sister and her family for their love, endless support and enduring faith in me.

Kharagpur, June 2008 (Sudhamoy Mandal)

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