• Tidak ada hasil yang ditemukan

MICROBIOLOGY PPT LECTURE NOTES | Karya Tulis Ilmiah

N/A
N/A
Protected

Academic year: 2017

Membagikan "MICROBIOLOGY PPT LECTURE NOTES | Karya Tulis Ilmiah"

Copied!
78
0
0

Teks penuh

(1)

Campylobacter

(2)

Campylobacter

Among the most widespread cause of in fection in the world.

Cause both diarrheal and systemic dise ases

(3)

Typical Organisms

Gram-negative rods with comma, S, or “gull-wing” shapes. Motive, with a single polar flagellum

(4)

Culture

An atmosphere with reduced O2 (5% O2) with added CO2 (10% CO2)

At 42 (for selection)℃

Several selective media can be used (eg, Skirrow’s medium)

Two types of colonies:  watery and spreading

(5)

Virulence Factor

Lipopolysaccharides (LPS) with endotoxi c activity

(6)

Pathogenesis

The infection by oral route from food, drink, or contact with infected animals or animal p roducts(Milk, meat products ).

Susceptible to gastric acid (about 104 organisums)

Multiply in the small intestine invade the epithium produce inflammation cau se bloody stools

(7)

diarrheadiarrhea

malaise malaise feverfever

abdominal painabdominal pain

usually self-limiting antibiotics occassio

nally

bacteremia

small minoritysmall minority

Campylobacter

Campylobacter

- -

symptoms

symptoms

Incubation: 4-8d

Acute enteritis: 1w,

stools remain positive for 3 w

Acute colitis

Acute abdominal pain

Bacteremia: <1% C. jejuni

(8)

Diagnostic Laboratory

Tests

Specimens: Diarrheal stools

Smears: Gram-stained smears of stool may show the typical “gull-shaped” rods .

(9)

Control

(10)

Curved bacilli –

Former name - Campylobacter pylori,

H. pylori

(11)

Helicobacter pylori

(12)

Microbiology

Gram negative rod, curved,

Very Motile corkscrew motion

Microaerophilic, use amino acids and fatty acid

s rather than carbohydrates to obtain energy needs 10% CO2 and 5% O2

Urease productionCatalase productionOxidase positive

(13)

Virulence factors

vacA (vacuolationg associated) cytot oxin, Pathogenicity island: cag, cytot oxin associated gene A+genes relate d to bacterial secretion

Cag+ HP is much more associated

with peptic ulcer disease than Cag(--)

(14)
(15)

Pathogenesis

Motility – it moves into the mucus

and produces adhesins on gastric epithelial cells (not intestinal epit helial cells)

Urease production, breaks down t

he urea to ammonia which buffers t he pH around the bacterium.

Persists, escape defense mechani

(16)

Pathogenesis

H pylori invade the epithelial cell surfac e to a certain degree

Toxins and LPS may damage the muco sal cells

(17)
(18)

Epidemiology

Prevalence related to socioeconomic level during childhood.

Infection occurs in childhood, persists for decades

Prevalence among adults – 20%-100% Source – stomach of humans

Mode of transmission? Fecal-oral? Oral-oral? Vomiting and aerosols ?

(19)

Epidemiology

Under age 30 <20% At age 60 40-60%

In developing countries >80% in adults

(20)

Clinical features

Acute acquisition - nausea, vomiting, abdominal pain

last for 1w, later – gastritis.

Persistent colonization - after acquisition, persist for years. Asymptomatic.

Duodenal ulcer

- more than 90% with DU - carry HP.

(21)

Gastric ulcer - 50-80% HP

Gastric carcinoma -HP induces gastritis, gastritis is risk factor for Carcinoma.

Gastric lymphoma - MALToma: mucosa associated lymphoid tumors, strong

association with HP. Stage 1 is cured by antibiotics.

Esophageal diseases - HP protects against: gastroesophageal reflux, Barrette's

(22)

Immunity

An IgM antibody response to he infectio n is developed

(23)

Laboratory diagnosis

Endoscopy and biopsy.Urease detection

Culture

Urea breath test - samples of breath air are

collected by having the patient blow into a

tube before and 30 min after ingestion of 13 C-labeled urea, rapid, noninvasive, for

assessing response 4-8w post therapy, expensive but non invasive!!

(24)
(25)
(26)

Principles of therapy

Combination chemotherapy

Some drugs are effective in vitro, not in vivo - due to acidic pH - erythromycin

(27)

Principles of therapy

Triple therapy:

Bismuth+metronidazole+amoxicillin: eradication 60-90%, tetracyclines, macrolides -

clarithromycin

PPI proton pump inhibitors therapy:

omeprazolone lansoprazole: inhibit HP, urease, acid

(28)

PSEUDOMONAS

(29)

Common Characteristics

Gram-negative Motile

Aerobic rod

Some produce water-soluble pigments

Widely in soil, water, plants and animals

(30)

Some of the medically important pseudomonas

rRNA Homology Group and

Subgroup Genus and Species I. Fluorescent Group

Nonfluorescent Group Pseudomonas aeruginosa Pseudomonas aeruginosa Pseudomonas fluorescens Pseudomonas putida Pseudomonas stutzeri Pseudomonas mendocina

II. Burkholderia pseudomallei

Burkholderia mallei Burkholderia cepacia Ralstonia pickettii

III. Comamonas species

Acidovorax species

IV. Brevundimonas species

(31)

Pseudomonas aeruginosa

(32)

Pseudomonas aeruginosa

Pseudomonas aeruginosa

Widely distributed in nature

Frequently present in small numbers in the normal in testinal flora and on the skin

Commonly present in moist environments in hospi tals

(33)

Typical Organisms

Gram-negative rod ---- 0.6 ×2 μm

Unipolar flagellum (1~3) ---- actively mobile

Occurs as single bacteria , in pairs, and occasionall y in short chain

Capsule

(34)

Culture

Grow readily on many types of culture media

Smooth and round colonies

Multiple colony types in one culture

Fluorescent greenish color

(35)

Culture

Obligate aerobic

Grow well at 37~42℃and no growth at 4 ℃ Produce water-soluble pigments

Pyocyanin; Pyoverdin; Pyorubin; Pyomelanin

Produce hemolysin

Oxidase-positive

(36)
(37)

Virulence Determinants

Adhesins fimbriae (N-methyl-phenylalanine pili) polysaccharide capsule (glycocalyx) alginate slime (biofilm)

Invasins elastase

alkaline protease

hemolysins (phospholipase and lecithinase) cytotoxin (leukocidin)

(38)

Virulence Determinants

Motility/chemotaxis Flagella

Toxins Exoenzyme S Exotoxin A

Lipopolysaccharide

Antiphagocytic surface properties

Capsules, slime layers

LPS

Defense against serum bactericidal reaction

Slime layers,capsules LPS

(39)

Virulence Determinants

Defense against immune responses

Capsules, slime layers Protease enzymes

Genetic attributes

Genetic exchange by transduction and conjugation Inherent (natural) drug resistance

R factors and drug resistance plasmids

Ecologic criteria

Adaptability to minimal nutritional requirements Metabolic diversity

(40)

Inhibition of protein synthesis in

susceptible cells ----Toxin A

The resultant ADP-ribosyl-EF-2 complex is inactiv e in protein synthesis.

(41)

Diverse sites of infection by

(42)

Disease caused by

Pseudomonas aer

uginosa

Endocarditis

Respiratory infections Bacteremia

Central Nervous System infections Ear infections including external otitis Eye infections

Bone and joint infections Urinary tract infections

Gastrointestinal infections

(43)

Who are at risk?

People with cystic fibrosis Burn victims

Individuals with cancer

(44)

Diagnosis

Isolation and laboratory identification. blood agar plates

eosin-methylthionine blue agar. Gram morphology,

Inability to ferment lactose Positive oxidase reaction Fruity odor

Ability to grow at 4 2 ℃

(45)

Control and Treatment

The spread of Pseudomonas is best controlled b y cleaning and disinfecting medical equipment. In burn patients, topical therapy of the burn with antimicrobial agents such as silver sulfadiazine, coupled with surgical debridement, has markedl y reduced sepsis.

Susceptibility testing is essential.

(46)

Review

General characteristics: Gram negative rod, unipola r flagellum, actively motile; produce diffusible pigment s -- pyocyanin,gluorescin and pyorubin; aerobic, prod uce hemolysin.

Pathogenicity: cause suppurative infections in burn, trauma, etc.

Endotoxin: main pathogenic substance Exotoxin A

Extracellular enzymes:phospholipase, proteinase, e tc.

Bacteriological diagnosis:

Specimens

(47)
(48)

Common Characteristics

Small, gram-negative Pleomorphic

Require enrich media (usually containin g blood for isolation)

No flagellum, no spore

(49)

Haemophilus

Small Gram-negative coccobacilli , facultative anaerobes, non motil e

often resemble cocci, eg pneumo cocci,

most non-encapsulated strains --- virulent forms encapsulated

fastidious (require blood facto rs)

X factor = hematin V factor = NAD

(50)

Characteristics and growth requirements of s ome haemophilus species

X=heme; V=nicotinamide-adenine dinucleotide Species

Requires

Hemolysis

X V

H influenzae (H aegyptius)

(51)

-Haemophilus influenzae

Present in the nasopharynx of approximately 75 p ercent of healthy children and adults (non encaps ulated strains as the normal flora)

Rarely encountered in the oral cavity

Has not been detected in any other animal specie s

6 types(a-f) according to capsular polysaccharide type in the encapsulated strains

(52)

Biological Characteristics

----Morphology of organism

In specimens of acute infections:

short (1.5μm) coccoid bacilli

sometimes in pairs or short chain

In culture:

At 6~8 h on rich medium: small coccoid ba cilli

(53)

Biological Characteristics

---- Colonies

On brain-heart infusion agar with blood: Small, round, convex, iridescence

(24h)

On chocolate agar:

Takes 36~48h to develop 1mm colony

Satellite phenomenon Not hemolytic

(54)

Biological Characteristics

---- Growth

Aerobic or facultative anaerobic Grow well at 33~37℃

Require X and V factors

(55)

Virulence factor

Endotoxin

Lipooligosaccharide Neuraminidase

IgA protease

Fimbriae

(56)

Disease caused by H. influenzae

Naturally-acquired disease caused by H. infl uenzae seems to occur in humans only.

Bacteremia

Acute bacterial meningitis

Epiglottitis (obstructive laryngitis),

Cellulitis

Osteomyelitis Joint infections

Ear infections (otitis media)

(57)

An infant with severe vasculitis with di sseminated intravascular coagulation (DIC) with gangrene of the hand secon

dary to Haemophilus influenzae type b septicemia - prior to the availability

of the Hib vaccine

Child has swollen face due to Hib infection, tissue under th

e skin covering the jaw and c heek is infected, infection spr

(58)

Immunity

Relation of the age incidence of bacterial meningitis caused by

(59)

Host resistance to infection

Bactericidal antibody directed against P RP capsule of H. influenzae type b

(60)

Who is at risk?

Young children under 5 years (most case s occurring in infants between 6-11 month s of age)

Day-care attendees

Those in contact with household cases of Hib disease

(61)

Diagnosis

The history and the physical exam.

Detecting the bacteria in blood, spinal fluid, or other body fluid

(62)

Treatment

H. influenzae meningitis: ampicillin for strains of the b acterium that do not make ß-lactamase; a third-gener ation cephalosporin or chloramphenicol for strains tha t do.

Chloramphenicol for penicillin-resistant H. influenzae

Third-generation cephalosporins, such as ceftriaxone or cefotaxime: effective against H. influenzae and pen etrate the meninges well

Tetracyclines and sulfa drugs: sinusitis or respiratory i nfection caused by nontypable H. influenzae.

(63)

Control

(64)

LPS

Hemolysin IgA protease Pili

Outer membrane proteins

Gram stain and Laboratory Growth

Growth REQUIRES X (hemin) factor only (H. influenzae needs X and V)

Organisms also grow best in an increased CO2 environment.

DIAGNOSIS:

Generally made on presentation only. Soft, very painful chancre.

Gram negative pleomorphic rods

Coccobacilli filamentous

Haemophilus ducreyi

Painful chancres become pustular, eroded, ulcerated and

(65)

Legionella

46 species of Legionella and 68 sero groups.

1976 outbreak of pneumonia occurred a

mong persons attending a convention o f the American Legion in Philadelphia 费

城 .

(66)

Morphology

 Aerobic ,gram-negative, motile, catalase-positive

 Stain poorly by gram’s method,basic fuchsin sho

uld be used as the counterstain

 Grow on BCYE(buffered charcoal-yeast extract a

gar) with -ketoglutarate,at pH 6.9, 35 C,90% hu

midity

3 days of incubation,colonies are round or flat wit h entire edges.

(67)
(68)

Cell products

Produce distinctive 14-17 carbon branc hed-chain fatty acid.

Produce proteases, phosphatase, lipas e, Dnase,& Rnase

(69)

Transmission

contaminated air

infected water supply

(70)

Pathogenesis

Attach to phagocytic cell surface

1).no antibody : C3 deposite on the bacterial surface,attac hed to CR1 or CR3

2).antibody is present : Fc-mediated phagocytosis

fail to fuse with lysosomal granules and ribosomes,mitochondria aro

und vacuoles containing L pneumophila, Then cells are destroyed Pontiac fever

marked by fever, chills, headache and malaise that lasted 2-5 days

Legionnaire's disease

the more severe form of infection which includes pneumonia Immunity

(71)

Epidemiology

1)When legionellosis occur?

they are are usually occur in the summer and early fall, but cases m ay occur year-round. About 5% to 30% of people who have Legionn aires' disease die.

2)How is legionellosis spread?

Legionella are typically associated with aerosolized water (central ai r conditioning, cooling towers, showers, whirlpool spars).

Disease is generally waterborne; transmission occurs via airborne dr oplets.

3)Where is the Legionella bacterium found?

The organisms exist in many types of water systems in nature; hum ans are an accidental host.

Risk Groups

(72)

Diagnosis

Clinical: Symptoms include headache, malaise, rapid fever , nonproductive cough, Chest X-rays show pneumonia

Laboratory: immunofluorescent(IF) ,silver stain.

Legionella antigens in urine samples Legionella-specific serum antibody

Erythromycin Rifampicin

Pontiac fever requires no specific treatment

Treatment

Control

(73)

Bordetella

Classification – the genus contains thr ee medially import ant species

B. pertussis

B. parapertussis

B. bronchoseptica

(74)

Virulence

factors

Pili for attachment

Pertactin, an outer membrane protein also acts as an adhesion FHA: Filamentous hemagglutinin

PT: Pertussis toxin

Bacterial adenylate cyclase

Dermonecrotic toxin –causing strong vasoconstrictive effects.

Tracheal cytotoxin –the killing and sloughing off of ciliated cells in the re spiratory tract.

(75)
(76)

Incubation catarrhal paroxysmal convalescent

duration 7-10 days 1-2 weeks 2-4 weeks 3-4 weeks or longer

symptoms none rhinorrhea , malaise, fever, sneezing, anorexia

repetitive coughw ith whoops,vomiti ng,leukocytosis Diminished Paroxysmal cough, Development of secondary complications (pneumonia,seizures,enc ephalopathy) bacterial culture

Pertussis is generally a disease of in fants (50% of cases occur in children less than 1 year old).

Acquired by inhalation of droplets co ntaining the organism

The organism attaches to the ciliated cells of the respiratory tract. During an incubation period of 1-2 weeks, th e organism multiplies and starts to li berate its toxins.

Next the catarrhal stage occurs - Thi s last ~ 2 weeks.

Next is the paroxysmal stage that lasts ~ 4 weeks. The patient has rapid, consecutive coughs with a rapid inta ke of air between the coughs (has a whooping sound). The ciliary action of the respiratory tract has been com promised, mucous has accumulated, and the patient is trying to cough up the mucous accumulations. The co ughs are strong enough to break ribs! Other symptoms due to the activity of the released toxins include

(77)

B. Parapertussis

&

B. bronchoseptic

a

B. parapertussis – causes a mild form of wh ooping cough

B. bronchoseptica

Widespread in animals where it causes kennel c

ough.

Occasionally causes respiratory or wound infecti

(78)

CONTROL

Sanitary: This very contagious disease requires quarantine for a period of 4-6 weeks.

Immunological: Pertussis vaccine is a part of the required "DPT" schedule.

Referensi

Dokumen terkait

Flowchart Sistem Pendukung Keputusan Pemilihan Kartu Perdana Menggunakan Metode Weighted Product (WP) .... Flowchart Aplikasi Sistem Pendukung Keputusan Pemilihan

Khusus pada bagian land tenure masih sangat rentan konflik penguasaan karena belum terpetakannya bidang-bidang tanah secara keseluruhan, konflik pemanfaatan, kerancuan rejim

Judul : Sistem Proteksi Brankas Berpassword Menggunakan Selenoid Door Lock Sebagai Pembuka Brankas Berbasis Mikrokontroller.. Kategori :

* jika bahan makanan yang ditetesi oleh larutan benedict sebelum dipanaskan berwarna hijau toska atau biru dan setelah di panaskan berubah menjadi warna merah bata, atau

Hal tersebut membuat penggemar memiliki suatu hubungan :- - &gt;lonnl dengan klub sepakbola yang didukungnya sehingga penggemar dapat terus -:=:.lukung klub

Djaman Satori (dalam Suhardan, 2010 hlm. 28) mengemukakan bahwa supervisi pendidikan dipandang sebagai kegiatan yang ditujukan untuk memperbaiki dan meningkatkan mutu

Pada kondisi lingkungan eksternal, faktor yang menjadi peluang utama bagi Kebunsayur Surabaya adalah permintaan selada hidroponik yang tinggi, dan faktor yang menjadi

Pemberian mulsa organik seperti jerami akan memberikan suatu lingkungan mencegah penyinaran langsung sinar matahari yang berlebihan terhadap tanah serta kelembaban