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MICROBIOLOGY PPT LECTURE NOTES | Karya Tulis Ilmiah

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(1)
(2)
(3)

What does a pathogen have to

do?

Infect (infest) a host

Reproduce (replicate) itself

Ensure that its progeny are transmitted to

(4)

Mechanisms of

Transmission

Aerosols - inhalation of droplets, e.g.

Rhinoviruses, the 'Common Cold Virus' or

Adenoviruses.

Faecal-Oral - e.g. Astroviruses, Caliciviruses; these viruses cause acute gastroenteritis.

Vector-borne - e.g. in Arthropods such as

mosquitos, ticks, fleas: Arboviruses.

(5)

Entry into the Host

Skin - dead cells, therefore cannot support virus replication. Most viruses which infect via the skin require a breach in the physical integrity of this effective barrier, e.g. cuts or abrasions. Many viruses employ vectors, e.g. ticks, mosquitos or vampire bats to breach the barrier.

Respiratory tract - In contrast to skin, the

respiratory tract and all other mucosal surfaces possess sophisticated immune defence

mechanisms, as well as non-specific inhibitory

(6)

Entry into the Host

Gastrointestinal tract - a hostile

environment; gastric acid, bile salts, etc

Genitourinary tract - relatively less hostile than the above, but less

frequently exposed to extraneous viruses (?)

(7)
(8)

Transmission patterns

Horizontal Transmission: Direct

person-to-person spread.

Vertical Transmission: Relies on

PERSISTENCE of the agent to transfer infection from parents to offspring.

Several forms of vertical transmission can be distinguished:

• 1.Neonatal infection at birth, e.g. gonorrhorea, AIDS.

• 2.Infection in utero e.g. syphilis, CMV, Rubella (CRS), AIDS.

(9)

Primary Replication

Having gained entry to a potential host, the virus must initiate an infection by entering a susceptible cell. This frequently determines

whether the infection will remain localized at the site of entry or spread to become a systemic

(10)

Localized Infections

• Viruses Primary Replication

• Rhinoviruses U.R.T. • Rotaviruses Intestinal

epithelium

(11)

Systemic Infections

Virus

Primary Replication

Secondary Replication

Enteroviruses

Intestinal epithelium

Lymphoid

tissues, C.N.S.

Herpesviruses

(12)

Spread Throughout the Host

• Apart from direct cell-cell contact, there are

2 main mechanisms for spread throughout

the host:

(13)

via the bloodstream

Virus may get into the bloodstream by direct inoculation - e.g. Arthropod vectors, blood

transfusion or I.V. drug abuse. The virus may travel free in the plasma (Togaviruses, Enteroviruses), or in association with red cells (Orbiviruses), platelets (HSV), lymphocytes (EBV, CMV) or monocytes

(Lentiviruses). Primary viraemia usually proceeds and is necessary for spread to the blood stream, followed by more generalized, higher titre

(14)

via the nervous system

• spread to nervous system is preceded

by primary viraemia. In some cases,

spread occurs directly by contact with

neurons at the primary site of infection,

in other cases via the bloodstream.

Once in peripheral nerves, the virus can

spread to the CNS by axonal transport

along neurons (classic - HSV). Viruses

can cross synaptic junctions since these

frequently contain virus receptors,

(15)

Cell/Tissue Tropism

• Tropism - the ability of a virus to

replicate in particular cells or tissues - is controlled partly by the route of

infection but largely by the interaction of a virus attachment protein (V.A.P.)

(16)

Secondary Replication

Occurs in systemic infections when

a virus reaches other tissues in

which it is capable of replication,

e.g. Poliovirus (gut epithelium -

neurons in brain & spinal cord) or

Lentiviruses (macrophages - CNS +

many other tissues). If a virus can

be prevented from reaching tissues

where secondary replication can

(17)

:

Localized Infections: Virus: Primary Replication:

Rhinoviruses U.R.T.

Rotaviruses Intestinal epithelium Papillomavirus

es Epidermis

Systemic Infections:

Virus: Primary Replication: Secondary Replication:

Enteroviruses Intestinal epithelium Lymphoid tissues, C.N.S.

Herpesviruses Oropharynx or

(18)

Incubation periods of viral infections

Influenza 1-2d Chickenpox 13-17d

Common cold 1-3d Mumps 16-20d

Bronchiolitis,croup 3-5d Rubella 17-20d

Acute respiratory disease

5-7d Mononucleosis 30-50d

Dengue 5-8d Hepatitis A 15-40d

Herpes simplex 5-8d Hepatitis B 50-150d

Enteroviruses 6-12d Rabies 30-100d

poliomyelitis 5-20d Papilloma 50-150d

(19)

Types of Infection

• Inapparent

infection( Subclinical infection)

.

• Apparent infection

:

Acute infection

Persistent Infection

Chronic infections

(20)

Chronic Infection

Virus can be continuously detected ;

(21)

Latent infection

The Virus persists in an occult, or cryptic,

from most of the time. There will be

(22)

Slow virus infection

• A prolonged incubation period, lasting

(23)

Overall fate of the cell

• The cell dies in cytocidal infections

this may be acute (when infection is brief and self-limiting) or chronic (drawn out, only a few cells infected while the rest proliferate)-Cytocidal effect

• The cell lives in persistent infections

this may be productive or nonproductive (refers to whether or not virions are produced) or it may

(24)

Special cases

Transformation-

Integrated infection

(Viruses and Tumor)

(25)
(26)

Types of Viral infections at the cellular level

Type Virus production Fate of cell Abortive - No effect

Cytolytic + Death Persistent

Productive + Senescence Latent - No effect Transforming

(27)

Inhibition of cellular protein

synthesis Polioviruses, HSV, poxviruses, togaviruses Inhibition and degradation of

cellular DNA herpesviruses Alteration of cell membrane

structure

Glycoprotein insertion Syncytia formation

Disruption of cytoskeleton permeability

All enveloped viruses HSV, VZ virus, HIV HSV, naked viruses Togaviruses,

herpesviruses Inclusion bodies Rabies

Toxicity of Virion components Adenovirus fibers

(28)

3. Viral

(29)

Viral Immunopathogenesis

Influenza-like symptoms( IFN, lymphokins):

DTH and inflammation(Tcell, PMNs):

Immune-complex disease(AB, complement):

(30)

Persistence

Long term persistence of virus results from

two main mechanisms:

a) Regulation of lytic potential

(31)
(32)
(33)
(34)

H u m o r a

l

C e llu la r

N o n s p e c if ic

H u m o r a l

C e llu la r

S p e c if ic

macrophages, neutrophils NK cell complement, interferon, TNF etc.

T cells; other effectors cells antibodies

Components of the Immune

System

(35)
(36)

Innate or Nonspecific

Immunity

• Anatomic and Physiologic Barriers:

Intact skin / Mucus membrane

Temperature /Acidity of gastric juices

Protein factors

• Phagocytic Barriers : 3 major types of

phagocytic cells

(37)

IFN

Interferons are proteins produced by

cells infected with viruses, or exposed to

certain other agents, which protect other

cells against virus infection or decrease

drastically the virus yield from such cells.

Interferon itself is not directly the

anti-viral

agent, but it is the inducer of one or

many anti-viral mechanisms

(38)

Interferon inducing agents

(1) Viruses.

(2) dsRNA is a potent inducer, both viral

intermediates, and synthetic polyI-C.

(4) Certain Bacterial infections, and the

production of endotoxin.

(5) Metabolic activators/inhibitors.

Mitogens for gamma induction, also a

(39)

Properties of human interferons

Property IFN-alpha IFN-beta IFN-gamma Principal cell

source Epithelium leukocytes Fibroblasts Lymphocytes genes >20 1 1

Introns in genes no no yes

induction Viruses dsRNA Viruses dsRNA Immune activation Glycosylation no yes yes

Stability at pH2 stability stability labile Function Antiviral

infection

activation of NK cell

(40)

Activities of interferon

Antiviral actions

Interferons initiate an antiviral state in cells Interferons block viral protein synthesis Inferons inhibit cell growth

Immunomodulatory actions

Interferons-alpha and IFN-beta activate NK cells Interferons-alpha activates macrophages

Interferons-gamma activate macrophages Interferons increase MHC antigen expression Interferons regulate the activities of T cells

Other actions

(41)

Mechanism of action

Release from an initial infected cell occurs

IFN binds to a specific cell surface receptor on an other cell

IFN induces the “antiviral state” : synthesis of protein kinase, 2’5’ oligoadenylate synthetase, and ribonuclease L

Viral infection of the cell activates these enzymes

(42)
(43)
(44)
(45)

Diseases currently treated with

IFN-alpha and IFN-beta

• hepatitis C • hepatitis B

• papilloma warts and early trials with cervical carcinoma

• Kaposi sarcoma of AIDS, • colon tumors

• kidney tumors ( usually in combination with other drugs).

• Basal cell carcinoma

(46)

Nature killer/ NK cell

•NK cells are Activated by IFN-alpha/beta

•NK cells are Activated by IFN-alpha and IL-2

and

Activate macrophage

(47)
(48)

Macrophages

• Macrophages filter ciral particles from blood

• Macrophages inactivate opsonized virus particles

(49)

Complement

• Enhancing neutralization of Antibody

• Enhancing phagocytosis of virus

(50)

Specific immunity

(51)

Overview of Specific immunity

• specific recognition and selective

elimination of foreign molecules.

(52)

The Role of MHC

• The molecular basis of antigen recognition

by T cells is well understood. The TcR

recognizes short antigen-derived peptide

sequences presented in association with self

MHC class I or MHC class II molecules at

the surface of an

antigen presenting cell

(53)

The Role of MHC

• T cell recognition, therefore, involves direct

cell-cell contact between the

antigen-specific TcR on the T lymphocyte and an

MHC compatible cell which presents the

processed antigen in association with

(54)

The Role of MHC

• The finding that self MHC molecules are involved in the recognition of antigen by T lymphocytes led to the concept of "MHC restriction" of T cell

(55)

The Role of MHC

• In humans, the MHC is located on the short arm of

chromosome 6 and spans approximately 4 megabases of DNA. It can be divided into three regions termed class I, class II and class III:

• The class III region contains genes which encode a number of complement components and the tumour necrosis factor cytokines, amongst other molecules.

MHC class I molecules consist of a polymorphic,

MHC-encoded, membrane-spanning heavy chain, and a monomorphic light chain, beta2-microglobulin.

MHC class II molecules consist of a heterodimer of two

(56)
(57)
(58)
(59)
(60)

T cells

T cells are essential for controlling enveloped and noncytolytic viral infections

T cells recognizes viral peptides presented by MHC molecules on cell surfaces

Antigenic viral peptides can come from any viral protein TH1 CD4 responses are more important than TH2 responses

CD8 cytotoxic T cells respond to viral peptide-class I MHC protein complexes on the cell surface

TH2 CD4 responses are important for the maturation of antibody response

(61)

Antibody

Antibody neutralizes extracellular virue: it blocks viral attachment proteins it destablilizes viral structure

Antibody opsonizes virus for phagocytosis

Antibody promotes killing of target cell by the complement cascade and antibody-dependent cellular cytotoxicity

Antibody resolves lytic viral infections

Antibody blocks viremic spread to target tissue IgM is an indicator of recent or current infection IgG is more effective than LgM

(62)
(63)
(64)

Antibody

IgG IgM IgA

Function Memory Blood and tissue

Primary response

Clear viruses in blood

Mucus immunit

y

C: classic

pathway +++ -

-C : -C3 pathway - - +

placenta +++ -

(65)

-Antibody

(66)
(67)
(68)

Passive Immunity

• A high titer of antibody against a

specific virus

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